RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ARHGEF9O43307 516 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 GAS2O43903 313 aaKnown RBP12.53□□□□□ -0.4
VAMP1-201ENST00000361716 ANXA6P08133 673 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 ICAM3P32942 547 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 GPLD1P80108 840 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 USP51Q70EK9 711 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 HORMAD1Q86X24 394 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 MIB1Q86YT6 1006 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 DTWD1Q8N5C7 304 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 SPERTQ8NA61 448 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 ACTR8Q9H981 624 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 UBQLN1Q9UMX0 589 aaKnown RBP12.53□□□□□ -0.4
VAMP1-201ENST00000361716 SMIM28A0A1B0GU29 152 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 BBIP1A8MTZ0 92 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 UQCRC1P31930 480 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 CD86P42081 329 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 PSMD8P48556 350 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 PIK3CGP48736 1102 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 INCA1Q0VD86 236 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 PCID2Q5JVF3 399 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 PKN3Q6P5Z2 889 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 GCNT7Q6ZNI0 430 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 GPRIN1Q7Z2K8 1008 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 NECAB2Q7Z6G3 386 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 NRARPQ7Z6K4 114 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 OSTM1Q86WC4 334 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 PARP16Q8N5Y8 322 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 SLC47A1Q96FL8 570 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-201ENST00000361716 CCDC177Q9NQR7 707 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-201ENST00000361716 RGS18Q9NS28 235 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 USE1Q9NZ43 259 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 SARDHQ9UL12 918 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.52□□□□□ -0.4
VAMP1-201ENST00000361716 DPYSL4O14531 572 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 SCAMP3O14828 347 aaKnown RBP12.52□□□□□ -0.4
VAMP1-201ENST00000361716 RGS10O43665 173 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 SLC22A3O75751 556 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 CYP2B6P20813 491 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 CYP2C18P33260 490 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 HADHAP40939 763 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 ARCN1P48444 511 aaKnown RBP12.52□□□□□ -0.4
VAMP1-201ENST00000361716 PSMD5Q16401 504 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 AAK1Q2M2I8 961 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 HID1Q8IV36 788 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 P3H2Q8IVL5 708 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 TTC39CQ8N584 583 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 MINDY1Q8N5J2 469 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 AMER2Q8N7J2 671 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 PCNPQ8WW12 178 aaKnown RBP12.52□□□□□ -0.4
VAMP1-201ENST00000361716 SNAPC3Q92966 411 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 SPON2Q9BUD6 331 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 SP140LQ9H930 580 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 NTN4Q9HB63 628 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 EIF2B3Q9NR50 452 aaKnown RBP12.52□□□□□ -0.4
VAMP1-201ENST00000361716 TAS2R9Q9NYW1 312 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 POLG2Q9UHN1 485 aa12.52□□□□□ -0.4
VAMP1-201ENST00000361716 EVPLLA8MZ36 301 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 TSPAN4O14817 238 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 HRH2P25021 359 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 IL12RB1P42701 662 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 POLR2JP52435 117 aaKnown RBP12.52□□□□□ -0.41
VAMP1-201ENST00000361716 NUDT6P53370 316 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 GALK2Q01415 458 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 CDK5R2Q13319 367 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 FSCN1Q16658 493 aaKnown RBP12.52□□□□□ -0.41
VAMP1-201ENST00000361716 NOTUMQ6P988 496 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 ZNF517Q6ZMY9 492 aaPredicted RBP12.52□□□□□ -0.41
VAMP1-201ENST00000361716 ZDHHC17Q8IUH5 632 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 ATG16L2Q8NAA4 619 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 DYNC2LI1Q8TCX1 351 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 GPR152Q8TDT2 470 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 CCDC126Q96EE4 140 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 DUS3LQ96G46 650 aaKnown RBP12.52□□□□□ -0.41
VAMP1-201ENST00000361716 VMP1Q96GC9 406 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 MED30Q96HR3 178 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 ZBED3Q96IU2 234 aaPredicted RBP12.52□□□□□ -0.41
VAMP1-201ENST00000361716 YME1L1Q96TA2 773 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 TLR9Q9NR96 1032 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 NSMCE4AQ9NXX6 385 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 CDH9Q9ULB4 789 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 VPS4AQ9UN37 437 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 MAGEB16A2A368 324 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 E5RI56 91 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 USP2O75604 605 aaPredicted RBP12.52□□□□□ -0.41
VAMP1-201ENST00000361716 GABARAPO95166 117 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 RAP2AP10114 183 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 RPS12P25398 132 aaKnown RBP12.52□□□□□ -0.41
VAMP1-201ENST00000361716 PTGS2P35354 604 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 SLC26A2P50443 739 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 CLCNKBP51801 687 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 PPP2R2BQ00005 443 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 SLC27A1Q6PCB7 646 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 SCAMP5Q8TAC9 235 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 EXOC2Q96KP1 924 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 CNDP2Q96KP4 475 aaKnown RBP12.52□□□□□ -0.41
VAMP1-201ENST00000361716 VAT1Q99536 393 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 TSEN34Q9BSV6 310 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms