RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 TMEM25Q86YD3 366 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 CILP2Q8IUL8 1156 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 NPWQ8N729 165 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 BTN2A2Q8WVV5 523 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 CLSTN3Q9BQT9 956 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 RAB11FIP5Q9BXF6 653 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 MCOLN1Q9GZU1 580 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 PRPF19Q9UMS4 504 aaKnown RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 DUSP12Q9UNI6 340 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 ALPPL2P10696 532 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 RUNX3Q13761 415 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 GSTA3Q16772 222 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 CYP4Z2PQ8N1L4 340 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 LRIG1Q96JA1 1093 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 SIX3O95343 332 aaPredicted RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 ADH1BP00325 375 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 HOXD8P13378 290 aaPredicted RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 PRKCHP24723 683 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 AP1S2P56377 157 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 WDR4P57081 412 aaKnown RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 DSC3Q14574 896 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 SLC30A9Q6PML9 568 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 LRRC74BQ6ZQY2 392 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 ERN2Q76MJ5 926 aaKnown RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 CHMP1BQ7LBR1 199 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 NET1Q7Z628 596 aaPredicted RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 FAM129CQ86XR2 697 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 SORCS1Q8WY21 1168 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 SEMA3GQ9NS98 782 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 EGFL7Q9UHF1 273 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 KLF8O95600 359 aaPredicted RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 SLC6A2P23975 617 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 BUD31P41223 144 aaPredicted RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 ELAVL3Q14576 367 aaKnown RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 MRPL43Q8N983 215 aaKnown RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 RTKNQ9BST9 563 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 NUSAP1Q9BXS6 441 aaKnown RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 RIBC2Q9H4K1 309 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 OSER1Q9NX31 292 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 ECI2O75521 394 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 IMPDH2P12268 514 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 NDUFS1P28331 727 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 C1QTNF8P60827 252 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 HERVK_113P63132 956 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 ELF3P78545 371 aaPredicted RBP13.65□□□□□ -0.22
CTR9-201ENST00000361367 LRRC26Q2I0M4 334 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 ALKAL1Q6UXT8 129 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 IGDCC3Q8IVU1 814 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 TP53INP2Q8IXH6 220 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 FAM46DQ8NEK8 389 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 OR2T12Q8NG77 320 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 CENPIQ92674 756 aaPredicted RBP13.65□□□□□ -0.22
CTR9-201ENST00000361367 MTERF1Q99551 399 aaKnown RBP13.65□□□□□ -0.22
CTR9-201ENST00000361367 HOPXQ9BPY8 73 aaPredicted RBP13.65□□□□□ -0.22
CTR9-201ENST00000361367 ERVK-6Q9BXR3 956 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 NLE1Q9NVX2 485 aaPredicted RBP13.65□□□□□ -0.22
CTR9-201ENST00000361367 SERPINB7O75635 380 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 CHRNGP07510 517 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 GRIA2P42262 883 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 GATAD2AQ86YP4 633 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 ULK2Q8IYT8 1036 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 NXPE1Q8N323 547 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 DHRSXQ8N5I4 330 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 SCAMP4Q969E2 229 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 MRGPRX2Q96LB1 330 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 CEP44Q9C0F1 390 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 DDX18Q9NVP1 670 aaKnown RBP13.65□□□□□ -0.22
CTR9-201ENST00000361367 HCFC1R1Q9NWW0 138 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 C9JVG2 144 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 K7ERQ8 282 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 KERAO60938 352 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 GSNP06396 782 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 IMPDH1P20839 514 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 MOGSQ13724 837 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 VPS26BQ4G0F5 336 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 EXOSC8Q96B26 276 aaKnown RBP13.65□□□□□ -0.22
CTR9-201ENST00000361367 MRM3Q9HC36 420 aaKnown RBP13.65□□□□□ -0.22
CTR9-201ENST00000361367 MAGEE1Q9HCI5 957 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 C1orf109Q9NX04 203 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 SLC9A8Q9Y2E8 581 aa13.65□□□□□ -0.22
CTR9-201ENST00000361367 CNOT3O75175 753 aaKnown RBP13.64□□□□□ -0.23
CTR9-201ENST00000361367 ENTPD5O75356 428 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 HSD17B2P37059 387 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 TMED1Q13445 227 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 AAK1Q2M2I8 961 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 ZCCHC10Q8TBK6 192 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 TFGQ92734 400 aaPredicted RBP13.64□□□□□ -0.23
CTR9-201ENST00000361367 CDCA3Q99618 268 aaPredicted RBP13.64□□□□□ -0.23
CTR9-201ENST00000361367 OXSMQ9NWU1 459 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 A8MT66 165 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 ABLIM1O14639 778 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 PAK4O96013 591 aaPredicted RBP13.64□□□□□ -0.23
CTR9-201ENST00000361367 GSRP00390 522 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 GLDCP23378 1020 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 PLA2G16P53816 162 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 TOMM20Q15388 145 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 MINDY4Q4G0A6 757 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 APCDD1Q8J025 514 aa13.64□□□□□ -0.23
CTR9-201ENST00000361367 ABTB1Q969K4 478 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms