RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 COL6A2P12110 1019 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 GBE1Q04446 702 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 INTS6LQ5JSJ4 861 aaKnown RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 IDNKQ5T6J7 187 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 RNF220Q5VTB9 566 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PIK3R3Q92569 461 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 GPR20Q99678 358 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PPLO60437 1756 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 SMIM28A0A1B0GU29 152 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 LDOC1O95751 146 aaPredicted RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 RGMBQ6NW40 437 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 TOP1MTQ969P6 601 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 GAL3ST3Q96A11 431 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 DHRS1Q96LJ7 313 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 ELOVL2Q9NXB9 296 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 EIF2B4Q9UI10 523 aaKnown RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 NME6O75414 186 aaPredicted RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 NFATC1O95644 943 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 CCNCP24863 283 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 MAT2AP31153 395 aaKnown RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 SP140Q13342 867 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 BMT2Q1RMZ1 405 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 LCLAT1Q6UWP7 414 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 SMG7Q92540 1137 aaKnown RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 TRIM2Q9C040 744 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 DPEP2Q9H4A9 486 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PCDHGC4Q9Y5F7 938 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 TMEM131LA2VDJ0 1609 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PRAMEF33A0A0G2JMD5 474 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 SAP18O00422 153 aaKnown RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PRAMEF10O60809 474 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 GATBO75879 557 aaKnown RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 RPS9P46781 194 aaKnown RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 SLC13A2Q13183 592 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 CHIT1Q13231 466 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 LRRC73Q5JTD7 316 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 SWT1Q5T5J6 900 aaKnown RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 ZNF662Q6ZS27 426 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 OR2AJ1Q8NGZ0 328 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 LCN9Q8WX39 176 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 CHIAQ9BZP6 476 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 MUC13Q9H3R2 512 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 COPS7AQ9UBW8 275 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PCP4L1A6NKN8 68 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 ANXA2P2A6NMY6 339 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PIP5K1BO14986 540 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PLSCR1O15162 318 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 AP2A1O95782 977 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 SERPINA3P01011 423 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 ANXA2P07355 339 aaKnown RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 RHOQP17081 205 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 ALDH4A1P30038 563 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 CDH4P55283 916 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 ATXN7L2Q5T6C5 722 aaPredicted RBP18.15■□□□□ 0.5
SHANK1-202ENST00000359082 MON1BQ7L1V2 547 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PGAM4Q8N0Y7 254 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 OR10A6Q8NH74 314 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 CRELD1Q96HD1 420 aa18.15■□□□□ 0.5
SHANK1-202ENST00000359082 PRNPP04156 253 aa18.14■□□□□ 0.5
SHANK1-202ENST00000359082 FAM92BQ6ZTR7 304 aa18.14■□□□□ 0.5
SHANK1-202ENST00000359082 CPT1BQ92523 772 aa18.14■□□□□ 0.5
SHANK1-202ENST00000359082 AZIN2Q96A70 460 aa18.14■□□□□ 0.5
SHANK1-202ENST00000359082 OR51V1Q9H2C8 321 aa18.14■□□□□ 0.5
SHANK1-202ENST00000359082 MALT1Q9UDY8 824 aa18.14■□□□□ 0.5
SHANK1-202ENST00000359082 FKBP7Q9Y680 259 aa18.14■□□□□ 0.5
SHANK1-202ENST00000359082 MAGEB17A8MXT2 336 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 INSIG1O15503 277 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 SLC35G6P0C7Q6 338 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 HOXB6P17509 224 aaKnown RBP18.14■□□□□ 0.49
SHANK1-202ENST00000359082 PLD5Q8N7P1 536 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 ZNF781Q8N8C0 355 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 RNF121Q9H920 327 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 TCRBV7S2A1N4TA0A589 114 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 MYCLP1P12525 358 aaPredicted RBP18.14■□□□□ 0.49
SHANK1-202ENST00000359082 AP3S2P59780 193 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 EVX2Q03828 476 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 TBC1D25Q3MII6 688 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 TMEM220Q6QAJ8 160 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 RASGEF1CQ8N431 466 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 CERS5Q8N5B7 392 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 FAM13CQ8NE31 585 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 OR7D4Q8NG98 312 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 OR8H1Q8NGG4 311 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 EFHD2Q96C19 240 aaPredicted RBP18.14■□□□□ 0.49
SHANK1-202ENST00000359082 TBX5Q99593 518 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 FGFBP2Q9BYJ0 223 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 MID1O15344 667 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 C4BPAP04003 597 aaKnown RBP18.14■□□□□ 0.49
SHANK1-202ENST00000359082 FOXM1Q08050 763 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 TNFAIP8L3Q5GJ75 292 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 ANKRD22Q5VYY1 191 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 CLNKQ7Z7G1 428 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 OR4C6Q8NH72 309 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 GAS2L1Q99501 681 aaPredicted RBP18.14■□□□□ 0.49
SHANK1-202ENST00000359082 RGS17Q9UGC6 210 aaPredicted RBP18.14■□□□□ 0.49
SHANK1-202ENST00000359082 GTF2IRD1Q9UHL9 959 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 TM7SF2O76062 418 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 SMARCB1Q12824 385 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 USP30Q70CQ3 517 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 PDZD7Q9H5P4 517 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms