RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SELENONQ9NZV5 590 aa12.46□□□□□ -0.41
GGPS1-202ENST00000358966 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.46□□□□□ -0.41
GGPS1-202ENST00000358966 B2RBV5 119 aa12.46□□□□□ -0.41
GGPS1-202ENST00000358966 ADH1CP00326 375 aa12.46□□□□□ -0.41
GGPS1-202ENST00000358966 EEF1DP29692 281 aaKnown RBP12.46□□□□□ -0.41
GGPS1-202ENST00000358966 SERPINA13PQ6UXR4 307 aa12.46□□□□□ -0.41
GGPS1-202ENST00000358966 RTL10Q7L3V2 364 aa12.46□□□□□ -0.41
GGPS1-202ENST00000358966 MCCC1Q96RQ3 725 aaPredicted RBP12.46□□□□□ -0.41
GGPS1-202ENST00000358966 MYADMQ96S97 322 aa12.46□□□□□ -0.41
GGPS1-202ENST00000358966 FBRSL1Q9HCM7 1045 aaKnown RBP12.46□□□□□ -0.41
GGPS1-202ENST00000358966 GPC6Q9Y625 555 aaPredicted RBP12.46□□□□□ -0.41
GGPS1-202ENST00000358966 VPS13AQ96RL7 3174 aa12.46□□□□□ -0.41
GGPS1-202ENST00000358966 SLC9A3R1O14745 358 aaPredicted RBP12.46□□□□□ -0.42
GGPS1-202ENST00000358966 VILLO15195 856 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 SORBS2O94875 1100 aaKnown RBP12.46□□□□□ -0.42
GGPS1-202ENST00000358966 RPL26P61254 145 aaKnown RBP12.46□□□□□ -0.42
GGPS1-202ENST00000358966 FNDC3BQ53EP0 1204 aaKnown RBP12.46□□□□□ -0.42
GGPS1-202ENST00000358966 ACSBG2Q5FVE4 666 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 DEPDC1Q5TB30 811 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 CYHR1Q6ZMK1 362 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 KIAA0907Q7Z7F0 614 aaPredicted RBP12.46□□□□□ -0.42
GGPS1-202ENST00000358966 NXPE1Q8N323 547 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 KCNJ9Q92806 393 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 CDK15Q96Q40 435 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 FAM83CQ9BQN1 747 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 CPEB1Q9BZB8 566 aaKnown RBP12.46□□□□□ -0.42
GGPS1-202ENST00000358966 DERL2Q9GZP9 239 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 DPP7Q9UHL4 492 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 FBXO10Q9UK96 956 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 ADAMTS6Q9UKP5 1117 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 PACSIN3Q9UKS6 424 aa12.46□□□□□ -0.42
GGPS1-202ENST00000358966 RPL26L1Q9UNX3 145 aaKnown RBP12.46□□□□□ -0.42
GGPS1-202ENST00000358966 COL4A3Q01955 1670 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 CCDC160A6NGH7 325 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 ESR1P03372 595 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 TIMP2P16035 220 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 NNMTP40261 264 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 IL2P60568 153 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 HERVK_113P63132 956 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 SLC25A3Q00325 362 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 BTKQ06187 659 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 AARS2Q5JTZ9 985 aaKnown RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 PDE12Q6L8Q7 609 aaKnown RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 PARM1Q6UWI2 310 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 PARS2Q7L3T8 475 aaKnown RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 DLG3Q92796 817 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 KIAA1191Q96A73 305 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 OTUB2Q96DC9 234 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 C3orf30Q96M34 536 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 HBEGFQ99075 208 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 ERVK-6Q9BXR3 956 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 CEP44Q9C0F1 390 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 ZBTB26Q9HCK0 441 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 CACNA2D2Q9NY47 1150 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 IL36AQ9UHA7 158 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 MSRAQ9UJ68 235 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 BTRCQ9Y297 605 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 KNL1Q8NG31 2342 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 ZNF106Q9H2Y7 1883 aaKnown RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 C16orf96A6NNT2 1141 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 SPECC1L-ADORA2AF8WAN1 911 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 GYG2O15488 501 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 KERAO60938 352 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 H2AFYO75367 372 aaKnown RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 IMPDH1P20839 514 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 PTPN4P29074 926 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 SPINT3P49223 89 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 DNAJB13P59910 316 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 SCIMPQ6UWF3 145 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 IZUMO2Q6UXV1 221 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 RBM44Q6ZP01 1051 aaKnown RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 METTL3Q86U44 580 aaKnown RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 C11orf74Q86VG3 221 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 FBXO39Q8N4B4 442 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 LYSMD1Q96S90 227 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 SYTL2Q9HCH5 934 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 MID1IP1Q9NPA3 183 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 DEC1Q9P2X7 70 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 EIF2B4Q9UI10 523 aaKnown RBP12.45□□□□□ -0.42
GGPS1-202ENST00000358966 PLA2G4CQ9UP65 541 aa12.45□□□□□ -0.42
GGPS1-202ENST00000358966 TBC1D3BA6NDS4 549 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 CCDC22O60826 627 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 CDK14O94921 469 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 ZNF7P17097 686 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-202ENST00000358966 ARHGEF7Q14155 803 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 PHKG1Q16816 387 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 TCHHL1Q5QJ38 904 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-202ENST00000358966 GPR149Q86SP6 731 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 RBFAQ8N0V3 343 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 STAG3L4Q8TBR4 150 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.44□□□□□ -0.42
GGPS1-202ENST00000358966 APPL1Q9UKG1 709 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 HCN2Q9UL51 889 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 COMMD10Q9Y6G5 202 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 LRRK1Q38SD2 2015 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 GON4LQ3T8J9 2241 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 OR2AG2A6NM03 316 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 FADS2P1A8MWK0 482 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms