RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PLOD3O60568 738 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 HCAR3P49019 387 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 DGKQP52824 942 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 CDH12P55289 794 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 AP1S1P61966 158 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 ECT2LQ008S8 904 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 PAFAH1B3Q15102 231 aaKnown RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 SIX1Q15475 284 aaPredicted RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 MPPE1Q53F39 396 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 C9orf64Q5T6V5 341 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 HLA-DQA1Q5Y7H0 255 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 AKAP14Q86UN6 197 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 WDTC1Q8N5D0 677 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 GLB1L3Q8NCI6 653 aaPredicted RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 ABCB9Q9NP78 766 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 CD320Q9NPF0 282 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 DNAJB9Q9UBS3 223 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 NDUFS2O75306 463 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 FGF3P11487 239 aaPredicted RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 GSK3BP49841 420 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 MLLT6P55198 1093 aaPredicted RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 TAF1AQ15573 450 aaPredicted RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 MSANTD2Q6P1R3 559 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 KLHDC10Q6PID8 442 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 FAM131AQ6UXB0 335 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 ZZZ3Q8IYH5 903 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 COLGALT2Q8IYK4 626 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 ENDOVQ8N8Q3 282 aaKnown RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 MTERF1Q99551 399 aaKnown RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 IMP3Q9NV31 184 aaKnown RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 POLR3BQ9NW08 1133 aaPredicted RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 MYH6P13533 1939 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 ATG13O75143 517 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 UGT2B17O75795 530 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 CCNKO75909 580 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 IFNW1P05000 195 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 UGT1A6P19224 532 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 UGT1A1P22309 533 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 UGT1A4P22310 534 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 UGT1A3P35503 534 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 UGT1A5P35504 534 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 FKBP1BP68106 108 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 DAG1Q14118 895 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 UBAP2Q5T6F2 1119 aaKnown RBP13.53□□□□□ -0.24
VCP-201ENST00000358901 GPR153Q6NV75 609 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 RNF19BQ6ZMZ0 732 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 NANOGNBQ7Z5D8 188 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 OSTM1Q86WC4 334 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 HID1Q8IV36 788 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 PYCR2Q96C36 320 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 CLIP3Q96DZ5 547 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 TMEM209Q96SK2 561 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 MFSD1Q9H3U5 465 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 TXNRD2Q9NNW7 524 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 GPSM3Q9Y4H4 160 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 TLL2Q9Y6L7 1015 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 MAGEB17A8MXT2 336 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 E7ESA3 106 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 FFAR2O15552 330 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 ECI2O75521 394 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 OR6A2O95222 327 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 ALDOAP04075 364 aaKnown RBP13.53□□□□□ -0.24
VCP-201ENST00000358901 MYCLP1P12525 358 aaPredicted RBP13.53□□□□□ -0.24
VCP-201ENST00000358901 RPS6KA3P51812 740 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 NDUFAF6Q330K2 333 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 PDSS2Q86YH6 399 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 AP3S1Q92572 193 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 AP2M1Q96CW1 435 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 EQTNQ9NQ60 294 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 POLR1DQ9Y2S0 133 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 RPL4P36578 427 aaKnown RBP13.53□□□□□ -0.24
VCP-201ENST00000358901 SVOPLQ8N434 492 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 ARL14EPQ8N8R7 260 aaPredicted RBP13.53□□□□□ -0.24
VCP-201ENST00000358901 DENND1AQ8TEH3 1009 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 KCTD13Q8WZ19 329 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 GTPBP3Q969Y2 492 aaKnown RBP13.53□□□□□ -0.24
VCP-201ENST00000358901 CXorf40BQ96DE9 158 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 FUBP3Q96I24 572 aaKnown RBP eCLIP13.53□□□□□ -0.24
VCP-201ENST00000358901 GIMAP2Q9UG22 337 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 PLK4O00444 970 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 SYN3O14994 580 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 FGBP02675 491 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 RCVRNP35243 200 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 GALNT2Q10471 571 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 SIRPB2Q5JXA9 342 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 GCNT6Q5T4J0 391 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 CHPFQ8IZ52 775 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 PDPRQ8NCN5 879 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 TRPV3Q8NET8 790 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 TMEM165Q9HC07 324 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 TLR6Q9Y2C9 796 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 KCTD3Q9Y597 815 aa13.53□□□□□ -0.24
VCP-201ENST00000358901 FAM240BA0A1B0GVZ2 78 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 FADS2P1A8MWK0 482 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 K7EPI3 171 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 ADAMDEC1O15204 470 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 PGLSO95336 258 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 CXCL14O95715 111 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 CHRM5P08912 532 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms