RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TSPAN33Q86UF1 283 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 OR13H1Q8NG92 308 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 FBXO25Q8TCJ0 367 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 COQ10AQ96MF6 247 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 LRRC3BQ96PB8 259 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 RBBP8Q99708 897 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 DNAJC11Q9NVH1 559 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 TRBV23OR9-2A0A075B6M9 112 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 GREM1O60565 184 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 SDC3O75056 442 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 ADAM23O75077 832 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 KIAA0754O94854 1291 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 MLYCDO95822 493 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 ADRA1AP35348 466 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 ANXA11P50995 505 aaKnown RBP9.03□□□□□ -0.96
UPF2-202ENST00000357604 CSRP2Q16527 193 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 CACHD1Q5VU97 1274 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 TTC27Q6P3X3 843 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 ABHD13Q7L211 337 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 DDHD1Q8NEL9 900 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 HGH1Q9BTY7 390 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 ELOVL6Q9H5J4 265 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 NOL6Q9H6R4 1146 aaKnown RBP9.03□□□□□ -0.96
UPF2-202ENST00000357604 ZNF180Q9UJW8 692 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 A0A096LPK6 155 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 C17orf113A0A1B0GUU1 675 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 UGT1A9O60656 530 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 CTSLP07711 333 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 UGT1A6P19224 532 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 UGT1A1P22309 533 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 UGT1A4P22310 534 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 UGT1A3P35503 534 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 UGT1A5P35504 534 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 ZNF140P52738 457 aaPredicted RBP9.03□□□□□ -0.96
UPF2-202ENST00000357604 HK3P52790 923 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 BCL7AQ4VC05 210 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 NAXDQ8IW45 347 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 PGBD5Q8N414 524 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 GPR21Q99679 349 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 UGT1A7Q9HAW7 530 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 UGT1A10Q9HAW8 530 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 UGT1A8Q9HAW9 530 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 SMOXQ9NWM0 555 aa9.03□□□□□ -0.96
UPF2-202ENST00000357604 TM9SF1O15321 606 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 ZNF806P0C7X5 589 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 EPB42P16452 691 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 SLC1A2P43004 574 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 EPHA4P54764 986 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 GRIK2Q13002 908 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 EIF4EBP2Q13542 120 aaPredicted RBP9.02□□□□□ -0.96
UPF2-202ENST00000357604 ANKS6Q68DC2 871 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 PIM3Q86V86 326 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 DDIASQ8IXT1 998 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 METTL21AQ8WXB1 218 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 TFGQ92734 400 aaPredicted RBP9.02□□□□□ -0.96
UPF2-202ENST00000357604 ALG14Q96F25 216 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 RILPQ96NA2 401 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 NDC1Q9BTX1 674 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 ACTR8Q9H981 624 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 INTS9Q9NV88 658 aaKnown RBP9.02□□□□□ -0.96
UPF2-202ENST00000357604 KLHL3Q9UH77 587 aa9.02□□□□□ -0.96
UPF2-202ENST00000357604 EIF3LQ9Y262 564 aaKnown RBP9.02□□□□□ -0.96
UPF2-202ENST00000357604 TRPC5OSA6NMA1 111 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 SLC35G6P0C7Q6 338 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 GPLD1P80108 840 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 CTBP1Q13363 440 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 CWF19L1Q69YN2 538 aaKnown RBP9.02□□□□□ -0.97
UPF2-202ENST00000357604 GALNT7Q86SF2 657 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 FAIM2Q9BWQ8 316 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 ACSS3Q9H6R3 686 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 FETUBQ9UGM5 382 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 TRIP11Q15643 1979 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 TPP1O14773 563 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 GCKP35557 465 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 SLC26A3P40879 764 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 NXPH1P58417 271 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 MSLNQ13421 630 aaPredicted RBP9.02□□□□□ -0.97
UPF2-202ENST00000357604 C14orf28Q4W4Y0 310 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 RANBP10Q6VN20 620 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 CPLX4Q7Z7G2 160 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 PDZD3Q86UT5 571 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 C2CD4AQ8NCU7 369 aaPredicted RBP9.02□□□□□ -0.97
UPF2-202ENST00000357604 CDC26Q8NHZ8 85 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 IFI44Q8TCB0 444 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 SCAMP4Q969E2 229 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 IL17CQ9P0M4 197 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 ATXN10Q9UBB4 475 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 RARRES3Q9UL19 164 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 PATJQ8NI35 1801 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 TNFSF14O43557 240 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 PROS1P07225 676 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 PCSK2P16519 638 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 MAOBP27338 520 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 CCR8P51685 355 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 INHBCP55103 352 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 MC1RQ01726 317 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 ILKQ13418 452 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 C1orf61Q13536 156 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 PRUNE1Q86TP1 453 aa9.02□□□□□ -0.97
UPF2-202ENST00000357604 TMEM126BQ8IUX1 230 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms