RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 SETBP1Q9Y6X0 1596 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 PLOD3O60568 738 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 UPK1BO75841 260 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 MBL2P11226 248 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 RHDQ02161 417 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 CDCA2Q69YH5 1023 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 NOXA1Q86UR1 476 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 GID4Q8IVV7 300 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 HEXIM2Q96MH2 286 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 COG5Q9UP83 839 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 V9GYS6 101 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 MOXD2PA6NHM9 499 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 PPP1R2P9O14990 202 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 RASAL1O95294 804 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ACTC1P68032 377 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ACTA1P68133 377 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 IDI1Q13907 227 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 CBWD3Q5JTY5 395 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 CBWD5Q5RIA9 395 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 LARP4Q71RC2 724 aaKnown RBP eCLIP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 DSELQ8IZU8 1212 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 TSTD1Q8NFU3 115 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 DENND1AQ8TEH3 1009 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 MR1Q95460 341 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 LYARQ9NX58 379 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 A2MP01023 1474 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 SGCEO43556 437 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 RTP1P59025 263 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 RPP30P78346 268 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 PTSQ03393 145 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 TRABD2AQ86V40 505 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 SPOCK2Q92563 424 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 SHROOM2Q13796 1616 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 KIF1BO60333 1816 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 CENPAP49450 140 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 DEFA5Q01523 94 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 MKRN4PQ13434 485 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 C1orf94Q6P1W5 598 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ADGRD1Q6QNK2 874 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 NUDT16L1Q9BRJ7 211 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 OR51V1Q9H2C8 321 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 SETD1AO15047 1707 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 KIAA1210Q9ULL0 1709 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 CLIC2O15247 247 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ACTA2P62736 377 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ACTG2P63267 376 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ARHGAP1Q07960 439 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 PCDH1Q08174 1060 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 GRB14Q14449 540 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 N4BP2L1Q5TBK1 243 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ATF7IP2Q5U623 682 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 RNF220Q5VTB9 566 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 COMTD1Q86VU5 262 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 SLC41A1Q8IVJ1 513 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 B3GNT7Q8NFL0 401 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 PNMA5Q96PV4 448 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 COMMD4Q9H0A8 199 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 RBAKQ9NYW8 714 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 HTR3BO95264 441 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 BMP6P22004 513 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 KLRC1P26715 233 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 TRMT10BQ6PF06 316 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 C6orf89Q6UWU4 347 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 CHMP1BQ7LBR1 199 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 AVL9Q8NBF6 648 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 FBXO36Q8NEA4 188 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 SLC2A14Q8TDB8 520 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ACE2Q9BYF1 805 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 WASF2Q9Y6W5 498 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 LMTK2Q8IWU2 1503 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 CDC20Q12834 499 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 GPR107Q5VW38 600 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ZC3H14Q6PJT7 736 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 VSTM1Q6UX27 236 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 TSEN2Q8NCE0 465 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 OR4K3Q96R72 315 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ACTRT3Q9BYD9 372 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 NEUROD4Q9HD90 331 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 RPS6KB2Q9UBS0 482 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 PRELID3BQ9Y3B1 194 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 NKRFO15226 690 aaKnown RBP eCLIP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 SGPL1O95470 568 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 S100A3P33764 101 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 OSTNP61366 133 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 GALEQ14376 348 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ULK3Q6PHR2 472 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 GTF2H5Q6ZYL4 71 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 AGAP2Q99490 1192 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 LGR4Q9BXB1 951 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 EXOSC1Q9Y3B2 195 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 DUSP10Q9Y6W6 482 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 ZNF182P17025 639 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 GRAPQ13588 217 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 DDX39BQ13838 428 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 FCN2Q15485 313 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 FAM153CQ494X1 144 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 PRAMEF13Q5VWM6 474 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 FAM46CQ5VWP2 391 aa4.62□□□□□ -1.67
SYNE2-203ENST00000357395 PAPD4Q6PIY7 484 aaKnown RBP4.62□□□□□ -1.67
SYNE2-203ENST00000357395 PAPD5Q8NDF8 572 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms