RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 GPATCH11Q8N954 259 aa15.24■□□□□ 0.03
TRIM13-201ENST00000356017 VPS39Q96JC1 886 aa15.24■□□□□ 0.03
TRIM13-201ENST00000356017 RBBP8Q99708 897 aa15.24■□□□□ 0.03
TRIM13-201ENST00000356017 CDC6Q99741 560 aa15.24■□□□□ 0.03
TRIM13-201ENST00000356017 MCMBPQ9BTE3 642 aa15.24■□□□□ 0.03
TRIM13-201ENST00000356017 SLC32A1Q9H598 525 aa15.24■□□□□ 0.03
TRIM13-201ENST00000356017 PRDM8Q9NQV8 689 aa15.24■□□□□ 0.03
TRIM13-201ENST00000356017 CDV3Q9UKY7 258 aaKnown RBP15.24■□□□□ 0.03
TRIM13-201ENST00000356017 VWA7Q9Y334 891 aa15.24■□□□□ 0.03
TRIM13-201ENST00000356017 EXOC1LA0A1B0GW35 172 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 SLC5A10A0PJK1 596 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 A6NCN8 305 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 ERLIN1O75477 346 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 GPC4O75487 556 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 DUSP3P51452 185 aaPredicted RBP15.23■□□□□ 0.03
TRIM13-201ENST00000356017 SEPT7Q16181 437 aaKnown RBP15.23■□□□□ 0.03
TRIM13-201ENST00000356017 NAGSQ8N159 534 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 SFRP1Q8N474 314 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 GPR156Q8NFN8 814 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 OR6C4Q8NGE1 309 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 ATXN7L3BQ96GX2 97 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 APOLD1Q96LR9 279 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 NDNQ99608 321 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 STN1Q9H668 368 aaKnown RBP15.23■□□□□ 0.03
TRIM13-201ENST00000356017 SARS2Q9NP81 518 aaKnown RBP15.23■□□□□ 0.03
TRIM13-201ENST00000356017 SIRPGQ9P1W8 387 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 FTSJ1Q9UET6 329 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 BTBD3Q9Y2F9 522 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 RIF1Q5UIP0 2472 aaKnown RBP15.23■□□□□ 0.03
TRIM13-201ENST00000356017 DNAH14Q0VDD8 3507 aa15.23■□□□□ 0.03
TRIM13-201ENST00000356017 IFRD1O00458 451 aaPredicted RBP15.22■□□□□ 0.03
TRIM13-201ENST00000356017 SLC30A4O14863 429 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 CTIFO43310 598 aaKnown RBP15.22■□□□□ 0.03
TRIM13-201ENST00000356017 SLCO2B1O94956 709 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 LDOC1O95751 146 aaPredicted RBP15.22■□□□□ 0.03
TRIM13-201ENST00000356017 INHBAP08476 426 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 MSH2P43246 934 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 CLCN7P51798 805 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 LIMK2P53671 638 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 SLC12A2P55011 1212 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 POU4F1Q01851 419 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 EFTUD2Q15029 972 aaKnown RBP eCLIP15.22■□□□□ 0.034e-14■■■■□ 22
TRIM13-201ENST00000356017 BRD3Q15059 726 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 C14orf28Q4W4Y0 310 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 UBAP2Q5T6F2 1119 aaKnown RBP15.22■□□□□ 0.03
TRIM13-201ENST00000356017 HECTD2Q5U5R9 776 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 PIP4P1Q86T03 277 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 SLC9B2Q86UD5 537 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 ZBTB2Q8N680 514 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 UHMK1Q8TAS1 419 aaKnown RBP15.22■□□□□ 0.03
TRIM13-201ENST00000356017 MAPK15Q8TD08 544 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 LKAAEAR1Q8TD35 194 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 SLC44A1Q8WWI5 657 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 INPP5DQ92835 1189 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 ELMO2Q96JJ3 720 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 CNDP2Q96KP4 475 aaKnown RBP15.22■□□□□ 0.03
TRIM13-201ENST00000356017 PPCSQ9HAB8 311 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 FETUBQ9UGM5 382 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 TRMT6Q9UJA5 497 aaKnown RBP15.22■□□□□ 0.03
TRIM13-201ENST00000356017 MED16Q9Y2X0 877 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 DHRS7Q9Y394 339 aa15.22■□□□□ 0.03
TRIM13-201ENST00000356017 FAM95CA0A1B0GW59 222 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 CCDC151A5D8V7 595 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 NOBOXO60393 691 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 CBFA2T3O75081 653 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 CKMT1AP12532 417 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 BRAFP15056 766 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 XRCC1P18887 633 aaPredicted RBP15.21■□□□□ 0.03
TRIM13-201ENST00000356017 CSRP1P21291 193 aaKnown RBP15.21■□□□□ 0.03
TRIM13-201ENST00000356017 ABCG1P45844 678 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 BIRC2Q13490 618 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 NR0B2Q15466 257 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 PROX2Q3B8N5 592 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 RBM20Q5T481 1227 aaKnown RBP15.21■□□□□ 0.03
TRIM13-201ENST00000356017 CAPRIN2Q6IMN6 1127 aaKnown RBP15.21■□□□□ 0.03
TRIM13-201ENST00000356017 TAOK1Q7L7X3 1001 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 C17orf82Q86X59 251 aaPredicted RBP15.21■□□□□ 0.03
TRIM13-201ENST00000356017 SLC35F3Q8IY50 421 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 SLC22A15Q8IZD6 547 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 LILRA3Q8N6C8 439 aaPredicted RBP15.21■□□□□ 0.03
TRIM13-201ENST00000356017 MYRIPQ8NFW9 859 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 FAM136AQ96C01 138 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 TSPAN17Q96FV3 270 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 PAFAH2Q99487 392 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 GPR21Q99679 349 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 GPR22Q99680 433 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 WWP1Q9H0M0 922 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 OR52A5Q9H2C5 316 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 EPB41L4BQ9H329 900 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 ZNF180Q9UJW8 692 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 PADI4Q9UM07 663 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 PSMD13Q9UNM6 376 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 WDR37Q9Y2I8 494 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 HEBP2Q9Y5Z4 205 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 TDRD6O60522 2096 aaKnown RBP15.21■□□□□ 0.03
TRIM13-201ENST00000356017 CABIN1Q9Y6J0 2220 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 FAM186AA6NE01 2351 aa15.21■□□□□ 0.03
TRIM13-201ENST00000356017 POC1B-GALNT4F8VUJ3 575 aa15.21■□□□□ 0.02
TRIM13-201ENST00000356017 EIF3FO00303 357 aaPredicted RBP15.21■□□□□ 0.02
TRIM13-201ENST00000356017 TNFSF14O43557 240 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms