RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 MIB2Q96AX9 1013 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CENPTQ96BT3 561 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 EPSTI1Q96J88 318 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CCDC3Q9BQI4 270 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MLPHQ9BV36 600 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 KLK15Q9H2R5 256 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MMP27Q9H306 513 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 DPAGT1Q9H3H5 408 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SYTL2Q9HCH5 934 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TUFT1Q9NNX1 390 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SPASTQ9UBP0 616 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PADI2Q9Y2J8 665 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ATP6V0A2Q9Y487 856 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CLCA3PQ9Y6N3 262 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SVEP1Q4LDE5 3571 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ATP8B3O60423 1300 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PXDNLA1KZ92 1463 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 NEXMIFQ5QGS0 1516 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TTC36A6NLP5 189 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TARM1B6A8C7 271 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 STMND1H3BQB6 276 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PGRMC2O15173 223 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CYP27B1O15528 508 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SLC16A8O95907 504 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ACP2P11117 423 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 BMP5P22003 454 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 DGKAP23743 735 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 P2RX3P56373 397 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 COG7P83436 770 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TFF2Q03403 129 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CFHR1Q03591 330 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 COL10A1Q03692 680 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 FAM27E3Q08E93 113 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 HNF4GQ14541 408 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MEP1AQ16819 746 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SMTNL2Q2TAL5 461 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 IFI44LQ53G44 452 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PHLDA2Q53GA4 152 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PLEKHO1Q53GL0 409 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ODF2Q5BJF6 829 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 EPHA10Q5JZY3 1008 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 LDLRAP1Q5SW96 308 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PLA2G4FQ68DD2 849 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF782Q6ZMW2 699 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ARHGAP22Q7Z5H3 698 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 WDR53Q7Z5U6 358 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MFN1Q8IWA4 741 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MCPH1Q8NEM0 835 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 OLIG1Q8TAK6 271 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 URGCPQ8TCY9 931 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SAP25Q8TEE9 199 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TRPC4APQ8TEL6 797 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CACTINQ8WUQ7 758 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ATP6V0A1Q93050 837 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TEKT1Q969V4 418 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM18Q96B42 140 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 P2RY11Q96G91 374 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CCDC43Q96MW1 224 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 KLHL5Q96PQ7 755 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SLC39A8Q9C0K1 460 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MAP6D1Q9H9H5 199 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PNRC2Q9NPJ4 139 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 HPF1Q9NWY4 346 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SOHLH2Q9NX45 425 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ITGA11Q9UKX5 1188 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MAFFQ9ULX9 164 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PIN4Q9Y237 131 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TMED3Q9Y3Q3 217 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SQORQ9Y6N5 450 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 COL5A3P25940 1745 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SPATA31A5Q5VU36 1347 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SPATA31A7Q8IWB4 1347 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 FGD6Q6ZV73 1430 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 WDR7Q9Y4E6 1490 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 EFCAB5A4FU69 1503 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ZFYVE16Q7Z3T8 1539 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ZSCAN5CA6NGD5 496 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 AKR1B15C9JRZ8 316 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MPHOSPH10O00566 681 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 LETM1O95202 739 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 GSRP00390 522 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PDGFBP01127 241 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 FGBP02675 491 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 RLN1P04808 185 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PCNAP12004 261 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TFEBP19484 476 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 LIMK1P53667 647 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MAPK12P53778 367 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ALG10Q5BKT4 473 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ALG10BQ5I7T1 473 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 DENND2CQ68D51 928 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF627Q7L945 461 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CTU1Q7Z7A3 348 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ADAMTSL2Q86TH1 951 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ARID3BQ8IVW6 561 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MIGA1Q8NAN2 632 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 OR5M8Q8NGP6 311 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 OR5R1Q8NH85 324 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms