RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TMEM159Q96B96 161 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 COX14Q96I36 57 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 EGFL8Q99944 293 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 EBF4Q9BQW3 602 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 TRIM54Q9BYV2 358 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 ACTR5Q9H9F9 607 aaPredicted RBP18.33■□□□□ 0.52
PTN-201ENST00000348225 ZFR2Q9UPR6 939 aaKnown RBP18.33■□□□□ 0.52
PTN-201ENST00000348225 A0A1W2PQU0 124 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 TRPC5OSA6NMA1 111 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 RNGTTO60942 597 aaKnown RBP18.32■□□□□ 0.52
PTN-201ENST00000348225 SLCO2B1O94956 709 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 MLYCDO95822 493 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 MAPK9P45984 424 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 CLCQ05315 142 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 MAP7D1Q3KQU3 841 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 CDKL4Q5MAI5 379 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 KIAA1324Q6UXG2 1013 aaKnown RBP18.32■□□□□ 0.52
PTN-201ENST00000348225 UBE2R2Q712K3 238 aaPredicted RBP18.32■□□□□ 0.52
PTN-201ENST00000348225 RPS27LQ71UM5 84 aaKnown RBP18.32■□□□□ 0.52
PTN-201ENST00000348225 CLNKQ7Z7G1 428 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 ALYREFQ86V81 257 aaKnown RBP18.32■□□□□ 0.52
PTN-201ENST00000348225 TRAPPC5Q8IUR0 188 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 DEFB123Q8N688 67 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 ZNF483Q8TF39 744 aaPredicted RBP18.32■□□□□ 0.52
PTN-201ENST00000348225 MRGPRX1Q96LB2 322 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 LENG8Q96PV6 779 aaPredicted RBP18.32■□□□□ 0.52
PTN-201ENST00000348225 C1QTNF2Q9BXJ5 285 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 ATXN10Q9UBB4 475 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 PCTPQ9UKL6 214 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 GPR34Q9UPC5 381 aa18.32■□□□□ 0.52
PTN-201ENST00000348225 LRRC14BA6NHZ5 514 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 FCHO1O14526 889 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 GRID2O43424 1007 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 SERPINA6P08185 405 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 HIST1H2AGP0C0S8 130 aaPredicted RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 IL9P15248 144 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 HIST1H2ADP20671 130 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 CYP2A7P20853 494 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 CD72P21854 359 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 CDH13P55290 713 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 CDK3Q00526 305 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 PCBP2Q15366 365 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTN-201ENST00000348225 TMEM259Q4ZIN3 620 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 VWA5B1Q5TIE3 1220 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 SULT1C3Q6IMI6 304 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TMEM92Q6UXU6 159 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 HORMAD1Q86X24 394 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 HIST1H2AHQ96KK5 128 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 LINC00615Q96LM1 132 aaPredicted RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 HIST1H2AJQ99878 128 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 H2AFJQ9BTM1 129 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 SLC12A9Q9BXP2 914 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 CDYLQ9Y232 598 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3DA0A087WVF3 549 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3IA0A087WXS9 549 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3EA0A087X179 549 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3KA0A087X1G2 549 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TCRBV21S2A2A0A5A6 115 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3FA6NER0 549 aaPredicted RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 PRR23AA6NEV1 266 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3LB9A6J9 549 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 UBFD1O14562 309 aaKnown RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 LIN7AO14910 233 aaPredicted RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 GUCA1CO95843 209 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 ANXA5P08758 320 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3HP0C7X1 549 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TSPAN8P19075 237 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 NDUFV2P19404 249 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 AGTR2P50052 363 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 CCR3P51677 355 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 CDKL1Q00532 357 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 PRKCQQ04759 706 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 BNIP1Q12981 228 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 IRF4Q15306 451 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 PDCD2Q16342 344 aaPredicted RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 PHKG1Q16816 387 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 FAM91A1Q658Y4 838 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3GQ6DHY5 549 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3CQ6IPX1 549 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 METTL2BQ6P1Q9 378 aaKnown RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 ACAD11Q709F0 780 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 VRK3Q8IV63 474 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TBC1D3Q8IZP1 549 aaPredicted RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 TCAIMQ8N3R3 496 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TP53I13Q8NBR0 393 aaPredicted RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 OR56A4Q8NGH8 313 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TRPC4APQ8TEL6 797 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 ASB11Q8WXH4 323 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 SLC17A9Q9BYT1 436 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 NUF2Q9BZD4 464 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 WDR26Q9H7D7 661 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 PARVBQ9HBI1 364 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 POLMQ9NP87 494 aaPredicted RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 MID1IP1Q9NPA3 183 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 TXLNGQ9NUQ3 528 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 WWOXQ9NZC7 414 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 EIF2B4Q9UI10 523 aaKnown RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 PTBP2Q9UKA9 531 aaKnown RBP18.31■□□□□ 0.52
PTN-201ENST00000348225 SLC12A4Q9UP95 1085 aa18.31■□□□□ 0.52
PTN-201ENST00000348225 SORCS3Q9UPU3 1222 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms