RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PAFAH1B1P43034 410 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 CAPZBP47756 277 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 TTPAP49638 278 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 ARL4DP49703 201 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 CDKN1CP49918 316 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 TERF1P54274 439 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 ACVR1Q04771 509 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 PRKAA1Q13131 559 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 CYP1B1Q16678 543 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 IRGCQ6NXR0 463 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 SDCCAG8Q86SQ7 713 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 OOSP2Q86WS3 158 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 PIANPQ8IYJ0 282 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 CLDN19Q8N6F1 224 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 OR13J1Q8NGT2 312 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 GSDMBQ8TAX9 411 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 COG1Q8WTW3 980 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 ELMO1Q92556 727 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 ART4Q93070 314 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 RUNDC3BQ96NL0 473 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 TGM7Q96PF1 710 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 NAPGQ99747 312 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 ZPBPQ9BS86 351 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 COG4Q9H9E3 785 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 XAB2Q9HCS7 855 aaKnown RBP15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 CHRAC1Q9NRG0 131 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 TMEM9Q9P0T7 183 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 SLC2A6Q9UGQ3 507 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 MN1Q10571 1320 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 KIF26BQ2KJY2 2108 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 PRAMEF33A0A0G2JMD5 474 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 MAGEB16A2A368 324 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 CTAGE9A4FU28 777 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 OR51F1A6NGY5 319 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 MAP3K7O43318 606 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 PRAMEF10O60809 474 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 LIPCP11150 499 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 MLNP12872 115 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 CCL4P13236 92 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 MGAT1P26572 445 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 ITPKBP27987 946 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 CD151P48509 253 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 CFHR1Q03591 330 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 TLE3Q04726 772 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 MRNIPQ6NTE8 343 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 TTC27Q6P3X3 843 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 CEACAM20Q6UY09 585 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 ARHGAP22Q7Z5H3 698 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 MPP5Q8N3R9 675 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 C9orf72Q96LT7 481 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 FERD3LQ96RJ6 166 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 INSM2Q96T92 566 aaPredicted RBP15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 DDA1Q9BW61 102 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 RAB33BQ9H082 229 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 KIR3DX1Q9H7L2 352 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 MRM3Q9HC36 420 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 EPHA6Q9UF33 1036 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 ACSL6Q9UKU0 697 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 PCDHGA3Q9Y5H0 932 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 CFAP20Q9Y6A4 193 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 SAR1BQ9Y6B6 198 aa15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 COL27A1Q8IZC6 1860 aaPredicted RBP15.41■□□□□ 0.06
TSPAN4-201ENST00000346501 FRYQ5TBA9 3013 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 PMS2P1A4D2B8 440 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 STMND1H3BQB6 276 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 MATN2O00339 956 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 CD3EAPO15446 510 aaKnown RBP15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 SGTAO43765 313 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 NDUFS3O75489 264 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 C9P02748 559 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 ANKRD34CP0C6C1 535 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 PRSS56P0CW18 603 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 FGF3P11487 239 aaPredicted RBP15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 ATP1A2P50993 1020 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 TMED2Q15363 201 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 CACHD1Q5VU97 1274 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 PTRHD1Q6GMV3 140 aaKnown RBP15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 PCGF5Q86SE9 256 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 ACVR1CQ8NER5 493 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 GABPB2Q8TAK5 448 aaPredicted RBP15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 NAT14Q8WUY8 206 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 UBXN4Q92575 508 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 PANX3Q96QZ0 392 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 CD180Q99467 661 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 MVB12BQ9H7P6 319 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 ASIC3Q9UHC3 531 aa15.4■□□□□ 0.06
TSPAN4-201ENST00000346501 UBA6A0AVT1 1052 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 SDR42E2A6NKP2 422 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 PRMT5O14744 637 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 KPNA5O15131 536 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 POLR1CO15160 346 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 ZNF185O15231 689 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 APOA4P06727 396 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 ETV5P41161 510 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 MAGEA6P43360 314 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 CXADRP78310 365 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 CRADDP78560 199 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 MC2RQ01718 297 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 FOXM1Q08050 763 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 BOP1Q14137 746 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms