RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
CASC4-202ENST00000345795 TTC23LQ6PF05 361 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 PGAM4Q8N0Y7 254 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 CPSF7Q8N684 471 aaKnown RBP13.1□□□□□ -0.31
CASC4-202ENST00000345795 GPR26Q8NDV2 337 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 OR52J3Q8NH60 311 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 ITFG1Q8TB96 612 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 ACTRT2Q8TDY3 377 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 FUBP1Q96AE4 644 aaKnown RBP13.1□□□□□ -0.31
CASC4-202ENST00000345795 TEX37Q96LM6 180 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 FAM83DQ9H4H8 585 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 GSTO2Q9H4Y5 243 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 CTPS2Q9NRF8 586 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 CHIT1Q13231 466 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 SPANXN4Q5MJ08 99 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 LETMD1Q6P1Q0 360 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 FAM20CQ8IXL6 584 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 SPPL2AQ8TCT8 520 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 KCNN1Q92952 543 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 IL17FQ96PD4 163 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 C1QTNF1Q9BXJ1 281 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 STN1Q9H668 368 aaKnown RBP13.1□□□□□ -0.31
CASC4-202ENST00000345795 PCDHGB4Q9UN71 923 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 KNTC1P50748 2209 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 FOXD2O60548 495 aaPredicted RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 ALDOCP09972 364 aaKnown RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 FASP25445 335 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 CHRNB3Q05901 458 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 MADCAM1Q13477 382 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 GRIN2CQ14957 1233 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 PCBP2Q15366 365 aaKnown RBP eCLIP13.09□□□□□ -0.319e-21■■■■■ 84.4
CASC4-202ENST00000345795 PTCHD3Q3KNS1 767 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 WLSQ5T9L3 541 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 TMEM220Q6QAJ8 160 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 ADAMTSL2Q86TH1 951 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 AMBNQ9NP70 447 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 FAF1Q9UNN5 650 aaPredicted RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 KPNA5O15131 536 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 CLOCKO15516 846 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 OPN1SWP03999 348 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 COX7A2P14406 83 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 S100A3P33764 101 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 SATB1Q01826 763 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 ACSM2AQ08AH3 577 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 NFATC2Q13469 925 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 RFTN2Q52LD8 501 aaPredicted RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 ACSM2BQ68CK6 577 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 ZCCHC8Q6NZY4 707 aaKnown RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 PLD4Q96BZ4 506 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 NSMCE3Q96MG7 304 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 VN1R3Q9BXE9 311 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 OSBPL6Q9BZF3 934 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 TRIM15Q9C019 465 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 MAP3K13O43283 966 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 PCCBP05166 539 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 WDR5P61964 334 aaKnown RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 TRIM25Q14258 630 aaKnown RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 SPDYE7PQ495Y7 208 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 CCDC149Q6ZUS6 474 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 GOLGA7Q7Z5G4 137 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 OR5AK3PQ8NH89 298 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 IMP3Q9NV31 184 aaKnown RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 DUS2Q9NX74 493 aaKnown RBP13.09□□□□□ -0.31
CASC4-202ENST00000345795 RAPGEFL1Q9UHV5 662 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 OAZ3Q9UMX2 235 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 SORCS3Q9UPU3 1222 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 LZTS1Q9Y250 596 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 CHD7Q9P2D1 2997 aa13.09□□□□□ -0.31
CASC4-202ENST00000345795 hCG_2039718K7EN88 272 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 ZSCAN9O15535 394 aaPredicted RBP13.08□□□□□ -0.31
CASC4-202ENST00000345795 KRT6AP02538 564 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 ALBP02768 609 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 KRT6BP04259 564 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 FUT4P22083 530 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 NRIP1P48552 1158 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 KRT6CP48668 564 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 ERVPABLB-1P60509 514 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 GLYATQ6IB77 296 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 PSRC1Q6PGN9 363 aaPredicted RBP13.08□□□□□ -0.31
CASC4-202ENST00000345795 RAVER1Q8IY67 606 aaKnown RBP13.08□□□□□ -0.31
CASC4-202ENST00000345795 EGLN2Q96KS0 407 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 PANX1Q96RD7 426 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 PKMYT1Q99640 499 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 PCDHGB5Q9Y5G0 923 aa13.08□□□□□ -0.31
CASC4-202ENST00000345795 A0A1B0GTW7 788 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 ZNF197O14709 1029 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 VNN2O95498 520 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 TGFB1P01137 390 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 ALPPL2P10696 532 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 COL6A1P12109 1028 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 RPL34P49207 117 aaKnown RBP13.08□□□□□ -0.32
CASC4-202ENST00000345795 ATP6V0D1P61421 351 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 ESRRGP62508 458 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 PAGE3Q5JUK9 113 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 CXorf57Q6NSI4 855 aaKnown RBP13.08□□□□□ -0.32
CASC4-202ENST00000345795 SLC30A9Q6PML9 568 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 KERAO60938 352 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms