RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 MPOP05164 745 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 GLB1P16278 677 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 UGT1A6P19224 532 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 UGT1A1P22309 533 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 UGT1A4P22310 534 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 UGT1A3P35503 534 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 UGT1A5P35504 534 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 MSH2P43246 934 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 ABCG1P45844 678 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 EIF3BP55884 814 aaKnown RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 MPP1Q00013 466 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 CTBP1Q13363 440 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 ITGA9Q13797 1035 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 TMED2Q15363 201 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 SEPT7Q16181 437 aaKnown RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 ISXQ2M1V0 245 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 AMZ1Q400G9 498 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 TEDDM1Q5T9Z0 273 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 CDCP2Q5VXM1 449 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 NEPROQ6NW34 567 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 LRRTM4Q86VH4 590 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 DENND6AQ8IWF6 608 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 NAGSQ8N159 534 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 OR4L1Q8NH43 312 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 WDR48Q8TAF3 677 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 PEX13Q92968 403 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 SCARF2Q96GP6 870 aaPredicted RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 FAM167BQ9BTA0 163 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 ACBD3Q9H3P7 528 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 LRRN3Q9H3W5 708 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 RMI1Q9H9A7 625 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 VIPAS39Q9H9C1 493 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 TRIM39Q9HCM9 518 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 IL26Q9NPH9 171 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 KLC4Q9NSK0 619 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 CATSPERZQ9NTU4 200 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 MARCH4Q9P2E8 410 aaPredicted RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 CTNNAL1Q9UBT7 734 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 TBK1Q9UHD2 729 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 PSAT1Q9Y617 370 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 IKBKGQ9Y6K9 419 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 SLC30A1Q9Y6M5 507 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 PKD1L2Q7Z442 2459 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 URB1O60287 2271 aaKnown RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 DMXL2Q8TDJ6 3036 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 D6RAR5 112 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 CD3EAPO15446 510 aaKnown RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 TCEA3O75764 348 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 INHBAP08476 426 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 GCAP28676 217 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 ALDH4A1P30038 563 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 PBLDP30039 288 aaPredicted RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 SLC1A2P43004 574 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 CDKN1CP49918 316 aaPredicted RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 GABREP78334 506 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 FRG1Q14331 258 aaKnown RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 KHDC1Q4VXA5 237 aaKnown RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 FASTKD1Q53R41 847 aaKnown RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 OGFOD3Q6PK18 319 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 TAS2R42Q7RTR8 314 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 SPRED1Q7Z699 444 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 LRRC6Q86X45 466 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 ZNF761Q86XN6 746 aaPredicted RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 PROSER1Q86XN7 944 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 ARL14Q8N4G2 192 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 KDF1Q8NAX2 398 aaPredicted RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 CALML6Q8TD86 181 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 ATXN7L3BQ96GX2 97 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 VPS35Q96QK1 796 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 ZCCHC2Q9C0B9 1178 aaKnown RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 STN1Q9H668 368 aaKnown RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 FBXO6Q9NRD1 293 aaPredicted RBP13.56□□□□□ -0.24
TPM4-202ENST00000344824 TXNDC16Q9P2K2 825 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 CRLS1Q9UJA2 301 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 A0A1W2PQM1 296 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 OR2AG2A6NM03 316 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 PDZK1P1A8MUH7 402 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 AGPSO00116 658 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 GAPDHSO14556 408 aaPredicted RBP13.55□□□□□ -0.24
TPM4-202ENST00000344824 KMOO15229 486 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 NUDT21O43809 227 aaKnown RBP13.55□□□□□ -0.24
TPM4-202ENST00000344824 BRINP1O60477 761 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 SRP72O76094 671 aaKnown RBP13.55□□□□□ -0.24
TPM4-202ENST00000344824 EML2O95834 649 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 MSH3P20585 1137 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 ITGALP20701 1170 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 FOXN2P32314 431 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 OR1D5P58170 312 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 XIAPP98170 497 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 TMEM115Q12893 351 aaPredicted RBP13.55□□□□□ -0.24
TPM4-202ENST00000344824 SEMA3AQ14563 771 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 CYS1Q717R9 158 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 DET1Q7L5Y6 550 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 STRA8Q7Z7C7 330 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 SLC37A2Q8TED4 501 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 NAT14Q8WUY8 206 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 SLC44A1Q8WWI5 657 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 NRSN2Q9GZP1 204 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 1299.5 ms