RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 A0A1W2PP55 124 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 RGSL1A5PLK6 1076 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 SPECC1L-ADORA2AF8WAN1 911 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 OR7A17O14581 309 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 AZIN1O14977 448 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 MAGEC1O60732 1142 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 OR4F21O95013 312 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 COL9A1P20849 921 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 PREPP48147 710 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 COPAP53621 1224 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 INHBCP55103 352 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 SLC25A3Q00325 362 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 ELP6Q0PNE2 266 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 PON2Q15165 354 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 TMEM52BQ4KMG9 183 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 LETMD1Q6P1Q0 360 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 XKR5Q6UX68 686 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 ACAD11Q709F0 780 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 LARP4Q71RC2 724 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDC42-202ENST00000344548 TEX9Q8N6V9 391 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 TWIST2Q8WVJ9 160 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 ELMO1Q92556 727 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 PPP1R16AQ96I34 528 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 CLPTM1LQ96KA5 538 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 HDAC8Q9BY41 377 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 NOL11Q9H8H0 719 aaKnown RBP13.32□□□□□ -0.28
CDC42-202ENST00000344548 DYRK4Q9NR20 520 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 CIDEBQ9UHD4 219 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 SORCS3Q9UPU3 1222 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.32□□□□□ -0.28
CDC42-202ENST00000344548 IGLON5A6NGN9 336 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 GYG2O15488 501 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 LZTS3O60299 673 aaPredicted RBP13.32□□□□□ -0.28
CDC42-202ENST00000344548 GPC4O75487 556 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 ASGR2P07307 311 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 LINC00032P0C843 101 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 PDHA2P29803 388 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 PCBP2Q15366 365 aaKnown RBP eCLIP13.32□□□□□ -0.284e-6■■■■□ 20.3
CDC42-202ENST00000344548 RAET1GQ6H3X3 334 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 MTSS1LQ765P7 747 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 CYP2U1Q7Z449 544 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 GOLGA7Q7Z5G4 137 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 NRSN1Q8IZ57 195 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 IL17RCQ8NAC3 791 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 FAM13CQ8NE31 585 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 CEP70Q8NHQ1 597 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 SKA2Q8WVK7 121 aaPredicted RBP13.32□□□□□ -0.28
CDC42-202ENST00000344548 C19orf60Q96EN9 201 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 HBEGFQ99075 208 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 CCDC28BQ9BUN5 200 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 LIMD1Q9UGP4 676 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 SHISA7A6NL88 538 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 TRPC5OSA6NMA1 111 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 C1QTNF3-AMACRE9PGA6 284 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 RAD51BO15315 384 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 NUAK1O60285 661 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 MGRN1O60291 552 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 SNUPNO95149 360 aaKnown RBP13.31□□□□□ -0.28
CDC42-202ENST00000344548 ALDOCP09972 364 aaKnown RBP13.31□□□□□ -0.28
CDC42-202ENST00000344548 NFKBIAP25963 317 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 PIK3R1P27986 724 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 GRB7Q14451 532 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 CCDC85BQ15834 202 aaPredicted RBP13.31□□□□□ -0.28
CDC42-202ENST00000344548 TTLL9Q3SXZ7 439 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 CCSMST1Q4G0I0 132 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 SLC44A4Q53GD3 710 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 TMEM220Q6QAJ8 160 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 CHSY3Q70JA7 882 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 ADGRG6Q86SQ4 1221 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 NLRP8Q86W28 1048 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 PHYKPLQ8IUZ5 450 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 ZNF547Q8IVP9 402 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 RAVER1Q8IY67 606 aaKnown RBP13.31□□□□□ -0.28
CDC42-202ENST00000344548 CDYL2Q8N8U2 506 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 CSGALNACT1Q8TDX6 532 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 ASB11Q8WXH4 323 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 KLK6Q92876 244 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 EGFL8Q99944 293 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 LGR4Q9BXB1 951 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 OR2AG1Q9H205 316 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 AKTIPQ9H8T0 292 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 KCNK12Q9HB15 430 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 CD93Q9NPY3 652 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 KLC4Q9NSK0 619 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 PRKAB1Q9Y478 270 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 ST14Q9Y5Y6 855 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 COL4A2P08572 1712 aa13.31□□□□□ -0.28
CDC42-202ENST00000344548 A0A1W2PQF6 199 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 SOX1O00570 391 aaPredicted RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 LILRB5O75023 590 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 KATNA1O75449 491 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 ESRRBO95718 433 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 EPORP19235 508 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 PBLDP30039 288 aaPredicted RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 GPR1P46091 355 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 RPIAP49247 311 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 HTR6P50406 440 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 RASSF2P50749 326 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 RPS14P62263 151 aaKnown RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 FGL2Q14314 439 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms