RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PLCD3Q8N3E9 789 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 OR52B6Q8NGF0 335 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 EGFL8Q99944 293 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 VCXQ9H320 206 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 FAM83DQ9H4H8 585 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 IGFLR1Q9H665 355 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 ELOVL2Q9NXB9 296 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 POLG2Q9UHN1 485 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 TMPRSS11EQ9UL52 423 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 OARD1Q9Y530 152 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 TNPO3Q9Y5L0 923 aaKnown RBP18.3■□□□□ 0.52
HOXA9-201ENST00000343483 DPPA5A6NC42 116 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 MTX2O75431 263 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 CHEK2O96017 543 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 OR56A5P0C7T3 313 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 UROSP10746 265 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 NFKBIAP25963 317 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 GRB7Q14451 532 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 RAB30Q15771 203 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 PHKG1Q16816 387 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 CDK15Q96Q40 435 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 NOL11Q9H8H0 719 aaKnown RBP18.29■□□□□ 0.52
HOXA9-201ENST00000343483 KCTD5Q9NXV2 234 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 DLGAP2Q9P1A6 1054 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 SCOCQ9UIL1 159 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 SLC27A6Q9Y2P4 619 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 IGLV3-16A0A075B6K0 115 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 TSPAN11A1L157 253 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 MAGEA13PA6NCF6 341 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 C16orf96A6NNT2 1141 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 PRRT4C9JH25 899 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 MS4A2Q01362 244 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 PTK2BQ14289 1009 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 SFT2D3Q587I9 215 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 ETFBKMTQ8IXQ9 262 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 CDYL2Q8N8U2 506 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 PDPRQ8NCN5 879 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 OR9I1Q8NGQ6 314 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 PPP2R3CQ969Q6 453 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 DCUN1D1Q96GG9 259 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 ZNF382Q96SR6 550 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 ADA2Q9NZK5 511 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 MBD1Q9UIS9 605 aaPredicted RBP18.29■□□□□ 0.52
HOXA9-201ENST00000343483 PSMD13Q9UNM6 376 aa18.29■□□□□ 0.52
HOXA9-201ENST00000343483 HEPACAM2A8MVW5 462 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 KPNA3O00505 521 aaPredicted RBP18.28■□□□□ 0.52
HOXA9-201ENST00000343483 CASQ2O14958 399 aaPredicted RBP18.28■□□□□ 0.52
HOXA9-201ENST00000343483 OR4F21O95013 312 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 HGFP14210 728 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 VCLP18206 1134 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 CCR7P32248 378 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 HSPA7P48741 367 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 NME5P56597 212 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 PSME3P61289 254 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 MRPS22P82650 360 aaKnown RBP18.28■□□□□ 0.52
HOXA9-201ENST00000343483 PCBP2Q15366 365 aaKnown RBP eCLIP18.28■□□□□ 0.52
HOXA9-201ENST00000343483 FNDC3BQ53EP0 1204 aaKnown RBP18.28■□□□□ 0.52
HOXA9-201ENST00000343483 REP15Q6BDI9 236 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 PAOXQ6QHF9 649 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 GOLGA7Q7Z5G4 137 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 BHLHE22Q8NFJ8 381 aaPredicted RBP18.28■□□□□ 0.52
HOXA9-201ENST00000343483 DLG3Q92796 817 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 GATA6Q92908 595 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 SPDL1Q96EA4 605 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 LRIG1Q96JA1 1093 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 NR1H4Q96RI1 486 aaPredicted RBP18.28■□□□□ 0.52
HOXA9-201ENST00000343483 ACOX2Q99424 681 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 NUSAP1Q9BXS6 441 aaKnown RBP18.28■□□□□ 0.52
HOXA9-201ENST00000343483 DEC1Q9P2X7 70 aa18.28■□□□□ 0.52
HOXA9-201ENST00000343483 SNRPB2P08579 225 aaKnown RBP18.27■□□□□ 0.52
HOXA9-201ENST00000343483 ATP1B2P14415 290 aaPredicted RBP18.27■□□□□ 0.52
HOXA9-201ENST00000343483 SCIMPQ6UWF3 145 aa18.27■□□□□ 0.52
HOXA9-201ENST00000343483 EFL1Q7Z2Z2 1120 aaKnown RBP18.27■□□□□ 0.52
HOXA9-201ENST00000343483 PHYKPLQ8IUZ5 450 aa18.27■□□□□ 0.52
HOXA9-201ENST00000343483 PQLC1Q8N2U9 271 aa18.27■□□□□ 0.52
HOXA9-201ENST00000343483 KIAA1958Q8N8K9 716 aa18.27■□□□□ 0.52
HOXA9-201ENST00000343483 SKA2Q8WVK7 121 aaPredicted RBP18.27■□□□□ 0.52
HOXA9-201ENST00000343483 ATP6V1E2Q96A05 226 aa18.27■□□□□ 0.52
HOXA9-201ENST00000343483 CACNA2D2Q9NY47 1150 aa18.27■□□□□ 0.52
HOXA9-201ENST00000343483 C6orf203Q9P0P8 240 aaPredicted RBP18.27■□□□□ 0.52
HOXA9-201ENST00000343483 PCDHGA7Q9Y5G6 932 aa18.27■□□□□ 0.52
HOXA9-201ENST00000343483 TRIM38O00635 465 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 FBP2O00757 339 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 BCAS2O75934 225 aaPredicted RBP18.27■□□□□ 0.51
HOXA9-201ENST00000343483 UBTFL6P0CB48 400 aaPredicted RBP18.27■□□□□ 0.51
HOXA9-201ENST00000343483 HLA-EP13747 358 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 LBPP18428 481 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 VASPP50552 380 aaPredicted RBP18.27■□□□□ 0.51
HOXA9-201ENST00000343483 ATP4BP51164 291 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 ERVPABLB-1P60509 514 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 HSPA14Q0VDF9 509 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 GTF2H2Q13888 395 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 CRY1Q16526 586 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 GTF2H2CQ6P1K8 395 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 LETMD1Q6P1Q0 360 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 ZFP1Q6P2D0 407 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 PARS2Q7L3T8 475 aaKnown RBP18.27■□□□□ 0.51
HOXA9-201ENST00000343483 RIOK2Q9BVS4 552 aaKnown RBP18.27■□□□□ 0.51
HOXA9-201ENST00000343483 WWOXQ9NZC7 414 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 DKK3Q9UBP4 350 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms