RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.09□□□□□ -1.27
VCAN-202ENST00000342785 ERGIC3Q9Y282 383 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 UNCXA6NJT0 531 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 ASNA1O43681 348 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 GPR32O75388 356 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 OR6B1O95007 311 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 POP4O95707 220 aaKnown RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 TSPAN19P0C672 248 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 NR2F1P10589 423 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 PAICSP22234 425 aaKnown RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 CTSKP43235 329 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 YAP1P46937 504 aaKnown RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 GALNT18Q6P9A2 607 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 RANBP10Q6VN20 620 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 PLEKHM3Q6ZWE6 761 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CHSY3Q70JA7 882 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 ZDHHC21Q8IVQ6 265 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 TMEM248Q9NWD8 314 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 PSME2Q9UL46 239 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 DGKBQ9Y6T7 804 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 GRM6O15303 877 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 RGS10O43665 173 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 MAFKO60675 156 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 PRKD3O94806 890 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CLTBP09497 229 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ASMTP46597 345 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 TAZQ16635 292 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 SLC2A7Q6PXP3 512 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 TMPRSS11BQ86T26 416 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 FEM1AQ9BSK4 669 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 EHD3Q9NZN3 535 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ZIM2Q9NZV7 527 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 MARCH4Q9P2E8 410 aaPredicted RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 CD84Q9UIB8 345 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ENTPD4Q9Y227 616 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ZNF510Q9Y2H8 683 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CACNA1SQ13698 1873 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CRYBG1Q9Y4K1 1723 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 FPGTO14772 594 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 UGT2B11O75310 529 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 JAK1P23458 1154 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 NTSP30990 170 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 TALDO1P37837 337 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 UPP1Q16831 310 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 LDLRAD1Q5T700 205 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 SNX20Q7Z614 316 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 SERINC5Q86VE9 423 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CDK20Q8IZL9 346 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 C2orf15Q8WU43 125 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 PPP1R16AQ96I34 528 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 MTERF1Q99551 399 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 WDR6Q9NNW5 1121 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 H0Y858 1186 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 hCG_2039718K7EN88 272 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 NOBOXO60393 691 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 GUCY1B2O75343 617 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ERN1O75460 977 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 FADS2O95864 444 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 S1PR4O95977 384 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 GLUD1P00367 558 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 VARSP26640 1264 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 ZDHHC20Q5W0Z9 365 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 EGFLAMQ63HQ2 1017 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 FAM91A1Q658Y4 838 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 AHSA2Q719I0 299 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 DNAJB7Q7Z6W7 309 aaPredicted RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 COL26A1Q96A83 441 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 DERL2Q9GZP9 239 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CLN6Q9NWW5 311 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 RAPGEFL1Q9UHV5 662 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 TLL2Q9Y6L7 1015 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 SDK1Q7Z5N4 2213 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 G3V2L1 256 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CD68P34810 354 aaPredicted RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 RPL26P61254 145 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 MED22Q15528 200 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 C6orf136Q5SQH8 315 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 PDZK1Q5T2W1 519 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ARMC8Q8IUR7 673 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 C10orf53Q8N6V4 93 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 OR52J3Q8NH60 311 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 S100ZQ8WXG8 99 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 SCLYQ96I15 445 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 C1orf74Q96LT6 269 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 NSUN5Q96P11 429 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 LIN28AQ9H9Z2 209 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 AMBNQ9NP70 447 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 OGDHLQ9ULD0 1010 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 PHLPP1O60346 1717 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 DOT1LQ8TEK3 1739 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 A0A0D9SEW6 157 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 MTMR11A4FU01 709 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 AURKAO14965 403 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 HTRA2O43464 458 aaPredicted RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 CLIC3O95833 236 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 G6PDP11413 515 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 LAG3P18627 525 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CDH3P22223 829 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ARL4DP49703 201 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 TGFBIQ15582 683 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms