RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 TRIM38O00635 465 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 AQP9O43315 295 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 FTH1P19P0C7X4 201 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 STIP1P31948 543 aaKnown RBP10.16□□□□□ -0.78
TPM3-207ENST00000341372 CHRNA4P43681 627 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 SRP54P61011 504 aaKnown RBP10.16□□□□□ -0.78
TPM3-207ENST00000341372 PARP6Q2NL67 630 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 P3H1Q32P28 736 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 KCTD16Q68DU8 428 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 ENPP7Q6UWV6 458 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 RANBP10Q6VN20 620 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 KDELC2Q7Z4H8 507 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 RASGEF1CQ8N431 466 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 FSTL5Q8N475 847 aaPredicted RBP10.16□□□□□ -0.78
TPM3-207ENST00000341372 EID2Q8N6I1 236 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 FAM71DQ8N9W8 422 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 FAM181AQ8N9Y4 354 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 MAIP1Q8WWC4 291 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 OR1E3Q8WZA6 343 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 SCARF2Q96GP6 870 aaPredicted RBP10.16□□□□□ -0.78
TPM3-207ENST00000341372 COX14Q96I36 57 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 CNDP2Q96KP4 475 aaKnown RBP10.16□□□□□ -0.78
TPM3-207ENST00000341372 TMEM121Q9BTD3 319 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 DUSP23Q9BVJ7 150 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 FSD1LQ9BXM9 530 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 RAD18Q9NS91 495 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 HACD3Q9P035 362 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 CD84Q9UIB8 345 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 SLC17A4Q9Y2C5 497 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 PCDHGA1Q9Y5H4 931 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 PRSS38A1L453 326 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 LMO7DNF2Z398 122 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 H3BML4 177 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 SIGLEC6O43699 453 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 KIF5CO60282 957 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 URI1O94763 535 aaPredicted RBP10.16□□□□□ -0.78
TPM3-207ENST00000341372 UBXN7O94888 489 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 TRIM16O95361 564 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 LDOC1O95751 146 aaPredicted RBP10.16□□□□□ -0.78
TPM3-207ENST00000341372 PIRTP0C851 137 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 NTF4P34130 210 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 HMGCLP35914 325 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 GPR1P46091 355 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 ACADVLP49748 655 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 SHC2P98077 582 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 MSLNQ13421 630 aaPredicted RBP10.16□□□□□ -0.78
TPM3-207ENST00000341372 PRPSAP1Q14558 356 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 CCNG2Q16589 344 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 RNF220Q5VTB9 566 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 DTX3LQ8TDB6 740 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 ADAMTS14Q8WXS8 1223 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 AGAP2Q99490 1192 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 RIOK2Q9BVS4 552 aaKnown RBP10.16□□□□□ -0.78
TPM3-207ENST00000341372 CLPBQ9H078 707 aa10.16□□□□□ -0.78
TPM3-207ENST00000341372 MYLKQ15746 1914 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 LY6G6EA0A0G2JKS1 128 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 TTLL8A6PVC2 850 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 AURKAO14965 403 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 METTL18O95568 372 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 FGGP02679 453 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 CEACAM5P06731 702 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 IVLP07476 585 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 ALPPL2P10696 532 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 NAT1P18440 290 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 SLC19A1P41440 591 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 TNNT3P45378 269 aaPredicted RBP10.15□□□□□ -0.78
TPM3-207ENST00000341372 PRKG2Q13237 762 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 PRRT3Q5FWE3 981 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 FAXCQ5TGI0 409 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 PDPK2PQ6A1A2 396 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 ARHGEF18Q6ZSZ5 1173 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 SLCO6A1Q86UG4 719 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 GPR26Q8NDV2 337 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 LMX1AQ8TE12 382 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 TSACCQ96A04 125 aaPredicted RBP10.15□□□□□ -0.78
TPM3-207ENST00000341372 MVB12AQ96EY5 273 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 PLEKHG4BQ96PX9 1271 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 C19orf43Q9BQ61 176 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 FICDQ9BVA6 458 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 BOCQ9BWV1 1114 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 GPR63Q9BZJ6 419 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 FAM83DQ9H4H8 585 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 FEZ2Q9UHY8 353 aaPredicted RBP10.15□□□□□ -0.78
TPM3-207ENST00000341372 CNOT6Q9ULM6 557 aaKnown RBP10.15□□□□□ -0.78
TPM3-207ENST00000341372 TTC7AQ9ULT0 858 aaPredicted RBP10.15□□□□□ -0.78
TPM3-207ENST00000341372 SHOC2Q9UQ13 582 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 U3KQA8 63 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 PTPRBP23467 1997 aa10.15□□□□□ -0.78
TPM3-207ENST00000341372 ZFC3H1O60293 1989 aaKnown RBP10.15□□□□□ -0.79
TPM3-207ENST00000341372 ARHGEF17Q96PE2 2063 aaPredicted RBP10.14□□□□□ -0.79
TPM3-207ENST00000341372 FADS2P1A8MWK0 482 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 FFAR2O15552 330 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 CNOT4O95628 575 aaKnown RBP10.14□□□□□ -0.79
TPM3-207ENST00000341372 TNFP01375 233 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 CKMT2P17540 419 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 ACP1P24666 158 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 GRK2P25098 689 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 ILKQ13418 452 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 HID1Q8IV36 788 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 SLC25A41Q8N5S1 370 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms