RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 FAM227AF5H4B4 570 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 KIR2DS3K7RE56 304 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 TMPRSS2O15393 492 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 PAGE1O75459 146 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 CNOT4O95628 575 aaKnown RBP10.79□□□□□ -0.68
ATXN3-201ENST00000340660 ELFN1P0C7U0 828 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 F3P13726 295 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 ZNF30P17039 623 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 OR1E1P30953 314 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 CCR1P32246 355 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 KIR2DS5Q14953 304 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 PDCD2Q16342 344 aaPredicted RBP10.79□□□□□ -0.68
ATXN3-201ENST00000340660 ZNF789Q5FWF6 425 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 C1orf220Q5T0J3 134 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 FGD2Q7Z6J4 655 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 NETO2Q8NC67 525 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 ANKRD20A12PQ8NF67 263 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 MYRIPQ8NFW9 859 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 OR2Y1Q8NGV0 311 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 OR8K5Q8NH50 307 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 SGMS2Q8NHU3 365 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 THOC3Q96J01 351 aaKnown RBP10.79□□□□□ -0.68
ATXN3-201ENST00000340660 PLEKHG4BQ96PX9 1271 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 SIK2Q9H0K1 926 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 PANK4Q9NVE7 773 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 COX16Q9P0S2 106 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 CDC42EP3Q9UKI2 254 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 DYTNA2CJ06 578 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 SNX2O60749 519 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 DNAJC6O75061 913 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 FBXO21O94952 628 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 SLC2A3P11169 496 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 ACVRL1P37023 503 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 ME3Q16798 604 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 KRTCAP3Q53RY4 240 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 MLIPQ5VWP3 458 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 BEND5Q7L4P6 421 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 EID3Q8N140 333 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 TAS1R2Q8TE23 839 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 GDAP1L1Q96MZ0 367 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 TTYH3Q9C0H2 523 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 ACTR5Q9H9F9 607 aaPredicted RBP10.78□□□□□ -0.68
ATXN3-201ENST00000340660 ZC3H7BQ9UGR2 993 aaKnown RBP10.78□□□□□ -0.68
ATXN3-201ENST00000340660 KCNK6Q9Y257 313 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 PRKAB1Q9Y478 270 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 MFHAS1Q9Y4C4 1052 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 ASB1Q9Y576 335 aa10.78□□□□□ -0.68
ATXN3-201ENST00000340660 ABCA1O95477 2261 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 A0A087X1B8 175 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 I6L893 689 aaPredicted RBP10.77□□□□□ -0.69
ATXN3-201ENST00000340660 PRRG2O14669 202 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 EXOC3O60645 756 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 SMPD2O60906 423 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 GNA12Q03113 381 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 OLIG2Q13516 323 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 ACOX1Q15067 660 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 PLCL1Q15111 1095 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 CATSPEREQ5SY80 951 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 AFMIDQ63HM1 303 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 ARL6IP4Q66PJ3 421 aaKnown RBP10.77□□□□□ -0.69
ATXN3-201ENST00000340660 ZNF783Q6ZMS7 281 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 EPM2AIP1Q7L775 607 aaPredicted RBP10.77□□□□□ -0.69
ATXN3-201ENST00000340660 TRIM74Q86UV6 250 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 ZNF354CQ86Y25 554 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 GALNT13Q8IUC8 556 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 RPRMLQ8N4K4 120 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 MCUQ8NE86 351 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 FBXO18Q8NFZ0 1043 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 HAS2Q92819 552 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 PTERQ96BW5 349 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 NUS1Q96E22 293 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 EEF2KMTQ96G04 330 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 COQ10AQ96MF6 247 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 NSMCE3Q96MG7 304 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 IMPG2Q9BZV3 1241 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 TM6SF1Q9BZW5 370 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 RAB33BQ9H082 229 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.77□□□□□ -0.69
ATXN3-201ENST00000340660 FAM204AQ9H8W3 233 aa10.77□□□□□ -0.69
ATXN3-201ENST00000340660 CCDC66A2RUB6 948 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 NPIPA5E9PKD4 350 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 HSD11B2P80365 405 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 RAD51Q06609 339 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 USP45Q70EL2 814 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 CBLL1Q75N03 491 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 B4GALNT4Q76KP1 1039 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 KMT5CQ86Y97 462 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 TMTC1Q8IUR5 882 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 TTC30BQ8N4P2 665 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 MAPK1IP1LQ8NDC0 245 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 HCAR2Q8TDS4 363 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 CPLX3Q8WVH0 158 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 SEC16BQ96JE7 1060 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 DPH2Q9BQC3 489 aaPredicted RBP10.76□□□□□ -0.69
ATXN3-201ENST00000340660 TRIM51Q9BSJ1 452 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 BACH2Q9BYV9 841 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 YAE1D1Q9NRH1 226 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 DDIT4Q9NX09 232 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 NPIPA1Q9UND3 350 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 RNF114Q9Y508 228 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms