RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ANAPC2Q9UJX6 822 aa9.53□□□□□ -0.88
PTCHD4-201ENST00000339488 STOML2Q9UJZ1 356 aa9.53□□□□□ -0.88
PTCHD4-201ENST00000339488 GABRQQ9UN88 632 aa9.53□□□□□ -0.88
PTCHD4-201ENST00000339488 ERVK-19Q9WJR5 959 aa9.53□□□□□ -0.88
PTCHD4-201ENST00000339488 ALG5Q9Y673 324 aa9.53□□□□□ -0.88
PTCHD4-201ENST00000339488 UBR2Q8IWV8 1755 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 A0A096LPK6 155 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 RPS10-NUDT3A0A1W2PQS6 291 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 E2F3O00716 465 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 TRDMT1O14717 391 aaKnown RBP9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 ERN1O75460 977 aaKnown RBP9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 MEOX2P50222 304 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 PRKCDQ05655 676 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 HYAL2Q12891 473 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 SIM2Q14190 667 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 TATDN3Q17R31 274 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 TIGD7Q6NT04 549 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 DNAJC24Q6P3W2 148 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 TMEM270Q6UE05 265 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 B3GNT8Q7Z7M8 397 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 SULF1Q8IWU6 871 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 STPG2Q8N412 459 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 TEX47Q8TBZ9 253 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 YIPF5Q969M3 257 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 UBE2FQ969M7 185 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 GPRASP2Q96D09 838 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 ZBTB18Q99592 522 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 EBNA1BP2Q99848 306 aaKnown RBP9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 TASP1Q9H6P5 420 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 GALNT9Q9HCQ5 603 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 ING3Q9NXR8 418 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 COA4Q9NYJ1 87 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 PTGDR2Q9Y5Y4 395 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 NEMP2A6NFY4 417 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 TMEM191CA6NGB0 347 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 UBDO15205 165 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 SGCEO43556 437 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 SULT1B1O43704 296 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 C1QBP02746 253 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 ITGB3P05106 788 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 KLRK1P26718 216 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 CYP4F2P78329 520 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 CYP4F3Q08477 520 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 IL18R1Q13478 541 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF460Q14592 562 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 NFIL3Q16649 462 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 AAK1Q2M2I8 961 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 SPESP1Q6UW49 350 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 TIFABQ6ZNK6 161 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 RASAL3Q86YV0 1011 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 KIAA0319LQ8IZA0 1049 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 LNX2Q8N448 690 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 ARFGAP1Q8N6T3 406 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF555Q8NEP9 628 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 REPS1Q96D71 796 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC9A7Q96T83 725 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 TTPALQ9BTX7 342 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 RACGAP1Q9H0H5 632 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 RASSF1Q9NS23 344 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 WRAP73Q9P2S5 460 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 KCNH4Q9UQ05 1017 aa9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 KLF2Q9Y5W3 355 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-201ENST00000339488 KCPQ6ZWJ8 1503 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 MYO18AQ92614 2054 aaKnown RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 TCRBV16S1A1N1A0A5B0 115 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM92AA1XBS5 289 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 AQP12BA6NM10 295 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 UPK1AO00322 258 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC30A4O14863 429 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 TO15178 435 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CFDP00746 253 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 TNNI1P19237 187 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 RAB3AP20336 220 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ICAM3P32942 547 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CLCNKAP51800 687 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CRISP3P54108 245 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ISL1P61371 349 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 POU4F1Q01851 419 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 RUNX1T1Q06455 604 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 EXOSC2Q13868 293 aaKnown RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 FBXO43Q4G163 708 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF648Q5T619 568 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 AHSA2Q719I0 299 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 JAZF1Q86VZ6 243 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ERO1BQ86YB8 467 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 AQP12AQ8IXF9 295 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM86B1Q8N7N1 296 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 KCTD6Q8NC69 237 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF540Q8NDQ6 660 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 C3orf58Q8NDZ4 430 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 OR8K5Q8NH50 307 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 GPR151Q8TDV0 419 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 POF1BQ8WVV4 589 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CIDECQ96AQ7 238 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM149B1Q96BN6 582 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 FRMD6Q96NE9 622 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 AGAP2Q99490 1192 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 KIFC3Q9BVG8 833 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ACE2Q9BYF1 805 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms