RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 FUCA1P04066 466 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 DGKAP23743 735 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 MZF1P28698 734 aaPredicted RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 SOX4Q06945 474 aaPredicted RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 C16orf59Q7L2K0 433 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 SIX5Q8N196 739 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 CARNMT1Q8N4J0 409 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 APOLD1Q96LR9 279 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 SLC2A13Q96QE2 648 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 SLC30A3Q99726 388 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 TXNRD2Q9NNW7 524 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 TMCC3Q9ULS5 477 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 SLC27A5Q9Y2P5 690 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 PCDHB5Q9Y5E4 795 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 F8W810 466 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 TMX2-CTNND1H3BSU7 103 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 TLR5O60602 858 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 ALDOCP09972 364 aaKnown RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 CTPS1P17812 591 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 NKX2-5P52952 324 aaPredicted RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 ZNF280AP59817 542 aaPredicted RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 ACSM2AQ08AH3 577 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 HSPA14Q0VDF9 509 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 BOP1Q14137 746 aaKnown RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 PKDCCQ504Y2 493 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 ACSM2BQ68CK6 577 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 PRR23BQ6ZRT6 265 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 MON1AQ86VX9 555 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 SLC7A5P1Q8MH63 180 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 ITPKCQ96DU7 683 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 PCDHB9Q9Y5E1 797 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 SMIM35A0A1B0GVV1 85 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 H3BN98 237 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 PRMT5O14744 637 aaPredicted RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 CD1DP15813 335 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 VARSP26640 1264 aaKnown RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 RECQLP46063 649 aaPredicted RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 CRYBB1P53674 252 aaPredicted RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 CD47Q08722 323 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 GTF2H2Q13888 395 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 ZC3H12BQ5HYM0 836 aaKnown RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 NOL9Q5SY16 702 aaKnown RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 GTF2H2CQ6P1K8 395 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 KRT73Q86Y46 540 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 HS3ST5Q8IZT8 346 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 C19orf18Q8NEA5 215 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 C17orf50Q8WW18 174 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 RPRD1BQ9NQG5 326 aaKnown RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 RBPJLQ9UBG7 517 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 FKBPLQ9UIM3 349 aa12.29□□□□□ -0.44
RIOK3-201ENST00000339486 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.29□□□□□ -0.44
RIOK3-201ENST00000339486 DFNA5O60443 496 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 ANXA5P08758 320 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 HTR1EP28566 365 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 RRM2P31350 389 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 HPCAL1P37235 193 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 ELP6Q0PNE2 266 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 CDH18Q13634 790 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 C1DQ13901 141 aaKnown RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 SPDYE7PQ495Y7 208 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 DUSP28Q4G0W2 176 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 PHACTR4Q8IZ21 702 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 GOLM1Q8NBJ4 401 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 OMA1Q96E52 524 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 AARSD1Q9BTE6 412 aaKnown RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 C1QTNF1Q9BXJ1 281 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 RBM38Q9H0Z9 239 aaKnown RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 FAM118AQ9NWS6 357 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 CRNNQ9UBG3 495 aaPredicted RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 PRRC2BQ5JSZ5 2229 aaKnown RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 ARVCFO00192 962 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 PDHXO00330 501 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 S1PR4O95977 384 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 EFNA1P20827 205 aaPredicted RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 PBX3P40426 434 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 TAB1Q15750 504 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 TYW3Q6IPR3 259 aaKnown RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 DEFB132Q7Z7B7 95 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 ST13P5Q8NFI4 369 aaPredicted RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 GTF3C2Q8WUA4 911 aaPredicted RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 KIAA1191Q96A73 305 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 TMEM125Q96AQ2 219 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 TM6SF2Q9BZW4 377 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 SDR39U1Q9NRG7 319 aaPredicted RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 SMPD4Q9NXE4 827 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 ERVK-18Q9QC07 812 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 COL2A1P02458 1487 aaPredicted RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 RBM47A0AV96 593 aaKnown RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 NBNO60934 754 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 OGNP20774 298 aaKnown RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 CD247P20963 164 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 EDNRBP24530 442 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 DCKP27707 260 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 CHI3L1P36222 383 aaPredicted RBP12.28□□□□□ -0.44
RIOK3-201ENST00000339486 CRATP43155 626 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 SYTL3Q4VX76 610 aa12.28□□□□□ -0.44
RIOK3-201ENST00000339486 TIGD5Q53EQ6 642 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms