RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 MON1BQ7L1V2 547 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 EPB41L1Q9H4G0 881 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 LTBP3Q9NS15 1303 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 PDCD5O14737 125 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 ADH5P11766 374 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 GNALP38405 381 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 PITPNAQ00169 270 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 DUPD1Q68J44 220 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 NUS1Q96E22 293 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 LGMNQ99538 433 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 ANKHQ9HCJ1 492 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 PCDHB16Q9NRJ7 776 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 DNAJC28Q9NX36 388 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 DOCK3Q8IZD9 2030 aa12.12□□□□□ -0.47
FN1-202ENST00000336916 RENP00797 406 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 ADCY4Q8NFM4 1077 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 EPYCQ99645 322 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 MGME1Q9BQP7 344 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 ARHGEF4Q9NR80 690 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 SLC38A8A6NNN8 435 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 ENO4A6NNW6 628 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 FSBPO95073 299 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 PSMG1O95456 288 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 CRHR2Q13324 411 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 PYDC2Q56P42 97 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 SNAP47Q5SQN1 464 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 IRF7Q92985 503 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 MBOAT7Q96N66 472 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 FBRSQ9HAH7 460 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 XPR1Q9UBH6 696 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 PCDHB3Q9Y5E6 796 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 NOX1Q9Y5S8 564 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 CLCA3PQ9Y6N3 262 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 ARVCFO00192 962 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 SCDO00767 359 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 NPHS1O60500 1241 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 SOCS5O75159 536 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 HADHBP55084 474 aaKnown RBP12.11□□□□□ -0.47
FN1-202ENST00000336916 WDR45BQ5MNZ6 344 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 OTUB2Q96DC9 234 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 GTF2IRD1Q9UHL9 959 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 TLL2Q9Y6L7 1015 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 TOGARAM1Q9Y4F4 1720 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 SEC24AO95486 1093 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 IL7RP16871 459 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 TNFSF9P41273 254 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
FN1-202ENST00000336916 RPL26P61254 145 aaKnown RBP12.11□□□□□ -0.47
FN1-202ENST00000336916 PRR23CQ6ZRP0 262 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
FN1-202ENST00000336916 RNF31Q96EP0 1072 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 MAT2BQ9NZL9 334 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 TCAF1Q9Y4C2 921 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 PEX11AO75192 247 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 ALOX5P09917 674 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 CDH24Q86UP0 819 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 C7orf61Q8IZ16 206 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 COPS5Q92905 334 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 DMTF1Q9Y222 760 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 PRAMEF12O95522 483 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 CYP17A1P05093 508 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 LINC00032P0C843 101 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 ADGRF1Q5T601 910 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 CUZD1Q86UP6 607 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 LIX1Q8N485 282 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 OR4C15Q8NGM1 316 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 KIAA1143Q96AT1 154 aaPredicted RBP12.11□□□□□ -0.47
FN1-202ENST00000336916 MCRS1Q96EZ8 462 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 LMLNQ96KR4 655 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 PLEKHG4BQ96PX9 1271 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 ARMCX1Q9P291 453 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 NPEPPSL1A6NEC2 478 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 ZNF823P16415 610 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 DUSP3P51452 185 aaPredicted RBP12.11□□□□□ -0.47
FN1-202ENST00000336916 ACTR1AP61163 376 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 ZC3HC1Q86WB0 502 aaKnown RBP12.11□□□□□ -0.47
FN1-202ENST00000336916 XYLT1Q86Y38 959 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 NTAN1Q96AB6 310 aa12.11□□□□□ -0.47
FN1-202ENST00000336916 PIH1D1Q9NWS0 290 aaKnown RBP12.11□□□□□ -0.47
FN1-202ENST00000336916 PLCH1Q4KWH8 1693 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 APLP1P51693 650 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 FSTL1Q12841 308 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 ZZZ3Q8IYH5 903 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 PCDH20Q8N6Y1 951 aaKnown RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 POU5F2Q8N7G0 328 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 WRAP53Q9BUR4 548 aaKnown RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 PAIP1Q9H074 479 aaKnown RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 FSCN2O14926 492 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 SMNDC1O75940 238 aaKnown RBP eCLIP12.1□□□□□ -0.473e-8■■■□□ 18.7
FN1-202ENST00000336916 MTHFRP42898 656 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 GSSP48637 474 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 ZBTB6Q15916 424 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 GRIK5Q16478 980 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 HSDL1Q3SXM5 330 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 DHDDSQ86SQ9 333 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 C10orf107Q8IVU9 208 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 BPIFB6Q8NFQ5 453 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms