RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 COMMD8Q9NX08 183 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 OGDHLQ9ULD0 1010 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 LZTS1Q9Y250 596 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 DHRS7Q9Y394 339 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 TTC34A8MYJ7 566 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 LIN7AO14910 233 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 ESR1P03372 595 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 FGF4P08620 206 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 CLTBP09497 229 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 UROSP10746 265 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ZNF7P17097 686 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 ITGALP20701 1170 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 CCR7P32248 378 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 IRS1P35568 1242 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 SLC26A3P40879 764 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 RHDQ02161 417 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 LAMB3Q13751 1172 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ZIK1Q3SY52 487 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 CMPK2Q5EBM0 449 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 TCEAL5Q5H9L2 206 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 OTUD3Q5T2D3 398 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 CHST15Q7LFX5 561 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 TMC8Q8IU68 726 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 TCEAL8Q8IYN2 117 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 METTL25Q8N6Q8 603 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 FAM86B1Q8N7N1 296 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 PBXIP1Q96AQ6 731 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ZNF689Q96CS4 500 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 VCX3BQ9H321 246 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ACTL8Q9H568 366 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 IKZF5Q9H5V7 419 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 CAAP1Q9H8G2 361 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 SLC6A13Q9NSD5 602 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 SUCOQ9UBS9 1254 aaKnown RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 B4GALT6Q9UBX8 382 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 VPS4AQ9UN37 437 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 COQ6Q9Y2Z9 468 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 HEMK1Q9Y5R4 338 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 DFNA5O60443 496 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 S100BP04271 92 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 SMIM18P0DKX4 95 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ZNF26P17031 533 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 ACRV1P26436 265 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ETV3P41162 512 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 PTSQ03393 145 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 GALNT1Q10472 559 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 TRAF3Q13114 568 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 CRY1Q16526 586 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 TMEM215Q68D42 235 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ZBTB49Q6ZSB9 765 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 Q6ZVL8 140 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ANKRD33Q7Z3H0 272 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ZBTB46Q86UZ6 589 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ST13P4Q8IZP2 240 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 ZBTB2Q8N680 514 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 C12orf76Q8N812 135 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 OR2AP1Q8NGE2 309 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 TRMT2BQ96GJ1 504 aaKnown RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 FBXL20Q96IG2 436 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 NR1H4Q96RI1 486 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 TCF12Q99081 682 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 NRTNQ99748 197 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 KCTD14Q9BQ13 255 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 SPATA16Q9BXB7 569 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 EBPLQ9BY08 206 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ALG2Q9H553 416 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ATP13A3Q9H7F0 1226 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 AIG1Q9NVV5 245 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ARL15Q9NXU5 204 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 OAZ3Q9UMX2 235 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 SLC22A2O15244 555 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 IGSF6O95976 241 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 IDO1P14902 403 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 SYN1P17600 705 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 SERPINA4P29622 427 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 ADSLP30566 484 aaPredicted RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 YAP1P46937 504 aaKnown RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 PREPP48147 710 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 CASP9P55211 416 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 CNPY1Q3B7I2 92 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 FAM174BQ3ZCQ3 159 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 INO80DQ53TQ3 878 aaPredicted RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 LY6G5CQ5SRR4 150 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 NANOGP8Q6NSW7 305 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 CYP20A1Q6UW02 462 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 EPHX4Q8IUS5 362 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 CMTR2Q8IYT2 770 aaKnown RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 C10orf111Q8N326 155 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 ZNF784Q8NCA9 323 aaPredicted RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 OR2T34Q8NGX1 318 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 OR2T3Q8NH03 318 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 CYGBQ8WWM9 190 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 OVCA2Q8WZ82 227 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 PEX13Q92968 403 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 TMEM125Q96AQ2 219 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 VOPP1Q96AW1 172 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 TMIGD2Q96BF3 282 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 VPS50Q96JG6 964 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 EGLN2Q96KS0 407 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 TSSK3Q96PN8 268 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms