RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SGO1Q5FBB7 561 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 RNF19BQ6ZMZ0 732 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 R3HCC1LQ7Z5L2 792 aaKnown RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 NKAPQ8N5F7 415 aaKnown RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 PDPRQ8NCN5 879 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 OR10A6Q8NH74 314 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 CLHC1Q8NHS4 586 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 PEX13Q92968 403 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 C17orf80Q9BSJ5 609 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 TDRD1Q9BXT4 1180 aaKnown RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 TOR3AQ9H497 397 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 SCUBE2Q9NQ36 999 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ZIM2Q9NZV7 527 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 LRFN2Q9ULH4 789 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 RAI2Q9Y5P3 530 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 C2orf81A6NN90 581 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ARVCFO00192 962 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 SYN3O14994 580 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 MAN1A2O60476 641 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ZBTB11O95625 1053 aaPredicted RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 UMPSP11172 480 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 CDH1P12830 882 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 AGXTP21549 392 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 HMOX2P30519 316 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 MAPKAPK2P49137 400 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 BMXP51813 675 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 RPL38P63173 70 aaKnown RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 HMGCS1Q01581 520 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 NFATC3Q12968 1075 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ATP1A4Q13733 1029 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 MEP1AQ16819 746 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 XAF1Q6GPH4 301 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 GOLGA7Q7Z5G4 137 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF554Q86TJ5 538 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 DENND1CQ8IV53 801 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 TSPEARQ8WU66 669 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ITCHQ96J02 903 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF583Q96ND8 569 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 PSKH2Q96QS6 385 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 NSUN3Q9H649 340 aaKnown RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ZFP14Q9HCL3 533 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 RIC8BQ9NVN3 520 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 FAIMQ9NVQ4 179 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 SEPT3Q9UH03 358 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ZNHIT2Q9UHR6 403 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 PCDHGA8Q9Y5G5 932 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 GOLGA8CPA6NN73 597 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF701M0R085 212 aaPredicted RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ANKRD28O15084 1053 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 LSM1O15116 133 aaKnown RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 B3GALT4O96024 378 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 THRBP10828 461 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 CTPS1P17812 591 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 LPOP22079 712 aaPredicted RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 MAP4P27816 1152 aaKnown RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 HSPA7P48741 367 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ALDH3A2P51648 485 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 DAG1Q14118 895 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 PHACTR4Q8IZ21 702 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 OR13F1Q8NGS4 319 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 EID2BQ96D98 161 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 C1QTNF3Q9BXJ4 246 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 DGCR6LQ9BY27 220 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 CREBZFQ9NS37 354 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 GKN1Q9NS71 199 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 AASSQ9UDR5 926 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 AGO1Q9UL18 857 aaKnown RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF510Q9Y2H8 683 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 PCDHB3Q9Y5E6 796 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 DGKBQ9Y6T7 804 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 U3KQV3 271 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 STX7O15400 261 aaKnown RBP12.12□□□□□ -0.47
VPS33B-201ENST00000333371 INHBBP09529 407 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 SLC2A4P14672 509 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 CR2P20023 1033 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 OXCT1P55809 520 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 BFSP2Q13515 415 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 LHX8Q68G74 356 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF773Q6PK81 442 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 TMEM179BQ7Z7N9 219 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 RBM23Q86U06 439 aaKnown RBP12.12□□□□□ -0.47
VPS33B-201ENST00000333371 PROSER1Q86XN7 944 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 C10orf111Q8N326 155 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 SLC15A4Q8N697 577 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 KRTCAP2Q8N6L1 136 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 AURKBQ96GD4 344 aaPredicted RBP12.12□□□□□ -0.47
VPS33B-201ENST00000333371 PLEKHA8Q96JA3 519 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF382Q96SR6 550 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 THUMPD3Q9BV44 507 aaKnown RBP12.12□□□□□ -0.47
VPS33B-201ENST00000333371 BOCQ9BWV1 1114 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 AMBRA1Q9C0C7 1298 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 MUC13Q9H3R2 512 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 ARMC7Q9H6L4 198 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 SLC6A13Q9NSD5 602 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 LIMD1Q9UGP4 676 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 KANSL1LA0AUZ9 987 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 MTMR11A4FU01 709 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 ANKRD66B4E2M5 251 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms