RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PAWRQ96IZ0 340 aaKnown RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 FNDC11Q9BVV2 318 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 EPB41L4BQ9H329 900 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 GALPQ9UBC7 116 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 FADS3Q9Y5Q0 445 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 SLX4Q8IY92 1834 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 MYCLP1P12525 358 aaPredicted RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 ITGA2P17301 1181 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 GTF2E2P29084 291 aaKnown RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 RPL5P46777 297 aaKnown RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 NR1H2P55055 460 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 EPS8Q12929 822 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 VITQ6UXI7 678 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 CBR4Q8N4T8 237 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 ADCY4Q8NFM4 1077 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 EPB41L1Q9H4G0 881 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 CCDC177Q9NQR7 707 aaPredicted RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 PDP1Q9P0J1 537 aaPredicted RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 TRIM24O15164 1050 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 OR1F1O43749 312 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 GNRH1P01148 92 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 ERVK-21P61565 698 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 SERINC3Q13530 473 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 SIM2Q14190 667 aaPredicted RBP12.82□□□□□ -0.36
VSTM4-202ENST00000332853 ARMCX4Q5H9R4 360 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 ATAT1Q5SQI0 421 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 CILP2Q8IUL8 1156 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 KLHL25Q9H0H3 589 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 EBF3Q9H4W6 596 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 NKX1-2Q9UD57 310 aaPredicted RBP12.82□□□□□ -0.36
VSTM4-202ENST00000332853 N6AMT1Q9Y5N5 214 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 MAST2Q6P0Q8 1798 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 INPPL1O15357 1258 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 RFPL1O75677 317 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 GDF5P43026 501 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 NFKB2Q00653 900 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 TOP3AQ13472 1001 aaPredicted RBP12.82□□□□□ -0.36
VSTM4-202ENST00000332853 ANGPT1Q15389 498 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 KCTD21Q4G0X4 260 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 UBXN11Q5T124 520 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 C9orf64Q5T6V5 341 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 CYP2U1Q7Z449 544 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 CLN6Q9NWW5 311 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 DCLK1O15075 740 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 TYROBPO43914 113 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 COL6A1P12109 1028 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 FPGSQ05932 587 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 GNA13Q14344 377 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 SLC5A9Q2M3M2 681 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 SLC7A8Q9UHI5 535 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 NDRG2Q9UN36 371 aaKnown RBP12.82□□□□□ -0.36
VSTM4-202ENST00000332853 SAMD4AQ9UPU9 718 aaKnown RBP12.82□□□□□ -0.36
VSTM4-202ENST00000332853 EFCAB10A6NFE3 127 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 hCG_2039718K7EN88 272 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 ITGB1P05556 798 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 FRMD7Q6ZUT3 714 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.82□□□□□ -0.36
VSTM4-202ENST00000332853 HEATR4Q86WZ0 1026 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 GALNT13Q8IUC8 556 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 ZDHHC14Q8IZN3 488 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 SEC14L1Q92503 715 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 SIPA1L3O60292 1781 aaPredicted RBP12.82□□□□□ -0.36
VSTM4-202ENST00000332853 PRAMEF11O60813 436 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 FGF18O76093 207 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 C8GP07360 202 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 CCNYL3P0C7X3 344 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 MMAAQ8IVH4 418 aaKnown RBP12.82□□□□□ -0.36
VSTM4-202ENST00000332853 XAGE5Q8WWM1 108 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 PLEKHG4BQ96PX9 1271 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 KIFC1Q9BW19 673 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 HDHD2Q9H0R4 259 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 PALMDQ9NP74 551 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 TMLHEQ9NVH6 421 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 GIMAP2Q9UG22 337 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 OR10H1Q9Y4A9 318 aa12.82□□□□□ -0.36
VSTM4-202ENST00000332853 HSPB3Q12988 150 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 EIF2B5Q13144 721 aaKnown RBP12.81□□□□□ -0.36
VSTM4-202ENST00000332853 ZNHIT3Q15649 155 aaPredicted RBP12.81□□□□□ -0.36
VSTM4-202ENST00000332853 HDDC3Q8N4P3 179 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 WDR36Q8NI36 951 aaKnown RBP12.81□□□□□ -0.36
VSTM4-202ENST00000332853 RNF186Q9NXI6 227 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 DNAJA2O60884 412 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 SLC10A3P09131 477 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 GRASPQ7Z6J2 395 aaPredicted RBP12.81□□□□□ -0.36
VSTM4-202ENST00000332853 ACDQ96AP0 544 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 GLI3P10071 1580 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 K7EPI3 171 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 GMFGO60234 142 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 MAGEA10P43363 369 aaPredicted RBP12.81□□□□□ -0.36
VSTM4-202ENST00000332853 UGT2B15P54855 530 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 PIK3R6Q5UE93 754 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 SFRP1Q8N474 314 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 C19orf18Q8NEA5 215 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 ZNF461Q8TAF7 563 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 ZNF296Q8WUU4 475 aaPredicted RBP12.81□□□□□ -0.36
VSTM4-202ENST00000332853 RNFT2Q96EX2 444 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 FBXW2Q9UKT8 454 aa12.81□□□□□ -0.36
VSTM4-202ENST00000332853 SH3GLB1Q9Y371 365 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms