RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 ZNF510Q9Y2H8 683 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 OARD1Q9Y530 152 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 POLR3HQ9Y535 204 aaPredicted RBP14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 ZFC3H1O60293 1989 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 KIAA1671Q9BY89 1806 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 DHRS12A0PJE2 317 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 FAM149AA5PLN7 773 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 FFAR3O14843 346 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 LSM1O15116 133 aaKnown RBP14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 GPR42O15529 346 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 GLUD1P00367 558 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 OTCP00480 354 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 NCK1P16333 377 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 CCR2P41597 374 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 LIPEQ05469 1076 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 BNIP2Q12982 314 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 GRAMD4Q6IC98 578 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 SATL1Q86VE3 508 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 ZNF597Q96LX8 424 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 CCT7Q99832 543 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 PIF1Q9H611 641 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 ARMC1Q9NVT9 282 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 HCFC1R1Q9NWW0 138 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 WWOXQ9NZC7 414 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 ACTR3BQ9P1U1 418 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 FAM234BA2RU67 622 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 AQP12BA6NM10 295 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 CCL16O15467 120 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 LHCGRP22888 699 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 HMOX2P30519 316 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 SNRPD1P62314 119 aaKnown RBP14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 AP5B1Q2VPB7 878 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 MYLK3Q32MK0 819 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 RFTN2Q52LD8 501 aaPredicted RBP14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 LCN8Q6JVE9 175 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 MACC1Q6ZN28 852 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 ERMP1Q7Z2K6 904 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 AQP12AQ8IXF9 295 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 ASIC4Q96FT7 647 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 KCTD14Q9BQ13 255 aaPredicted RBP14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 HTATIP2Q9BUP3 242 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 TRIM15Q9C019 465 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 ACTL8Q9H568 366 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 ZDHHC6Q9H6R6 413 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 LZTS1Q9Y250 596 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 ANGPTL3Q9Y5C1 460 aa14.61□□□□□ -0.07
CLCNKA-201ENST00000331433 SAC3D1A6NKF1 404 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 RSL1D1O76021 490 aaKnown RBP14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 CTSAP10619 480 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 PPM1AP35813 382 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 POLE2P56282 527 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 IRX1P78414 480 aaPredicted RBP14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 PRKG2Q13237 762 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 GPR33Q49SQ1 333 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 ATP13A5Q4VNC0 1218 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 ASTLQ6HA08 431 aaPredicted RBP14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 NANOGP8Q6NSW7 305 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 C22orf39Q6P5X5 142 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 CYP20A1Q6UW02 462 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 OTOP2Q7RTS6 562 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 ZFAND4Q86XD8 727 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 MYLIPQ8WY64 445 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 RHBDF1Q96CC6 855 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 LMLNQ96KR4 655 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 SPATA16Q9BXB7 569 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 SLC2A11Q9BYW1 496 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 NANOGQ9H9S0 305 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 HEBP1Q9NRV9 189 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 FARSBQ9NSD9 589 aaKnown RBP14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 MAFFQ9ULX9 164 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 SLC4A7Q9Y6M7 1214 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 SOCS2O14508 198 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 INPP4BO15327 924 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 RFC2P35250 354 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 DGKQP52824 942 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 B4GALNT1Q00973 533 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 PTSQ03393 145 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 EMX2Q04743 252 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 PRKCQQ04759 706 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 INPP5AQ14642 412 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 THEMIS2Q5TEJ8 643 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 LYPLAL1Q5VWZ2 237 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 DPY19L3Q6ZPD9 716 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 ZBTB49Q6ZSB9 765 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 TPRG1Q6ZUI0 275 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 TMEM25Q86YD3 366 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 SCRN2Q96FV2 425 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 PRPF18Q99633 342 aaKnown RBP14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 CD244Q9BZW8 370 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 SUV39H2Q9H5I1 410 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 OPTCQ9UBM4 332 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 SLCO3A1Q9UIG8 710 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 KIAA0100Q14667 2235 aaKnown RBP14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 CHD7Q9P2D1 2997 aa14.6□□□□□ -0.07
CLCNKA-201ENST00000331433 A0A1B0GTW7 788 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 OR6B1O95007 311 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 CXCL14O95715 111 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 UGT2B4P06133 528 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 FAM58BPP0C7Q3 252 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 BMP2P12643 396 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms