RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NR6A1Q15406 480 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 MPPE1Q53F39 396 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 MPP7Q5T2T1 576 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 CWF19L1Q69YN2 538 aaKnown RBP14.33□□□□□ -0.12
TPM3-206ENST00000330188 NANOGP8Q6NSW7 305 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 SLC2A7Q6PXP3 512 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 CYP20A1Q6UW02 462 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 MACC1Q6ZN28 852 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 TSPAN33Q86UF1 283 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 HS6ST3Q8IZP7 471 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 FIBINQ8TAL6 211 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 MRPS31Q92665 395 aaKnown RBP14.33□□□□□ -0.12
TPM3-206ENST00000330188 ISG20Q96AZ6 181 aaKnown RBP14.33□□□□□ -0.12
TPM3-206ENST00000330188 TMEM79Q9BSE2 394 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 TRIM4Q9C037 500 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 NANOGQ9H9S0 305 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 MAFFQ9ULX9 164 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 ZNF510Q9Y2H8 683 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 SH3BP1Q9Y3L3 701 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 CCL27Q9Y4X3 112 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 ARHGAP10A1A4S6 786 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 GRXCR2A6NFK2 248 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 A8MX80 341 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 NRG2O14511 850 aaPredicted RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 ANKRD28O15084 1053 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 NPPAP01160 153 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 G6PDP11413 515 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 ATP6V1B1P15313 513 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 NCK1P16333 377 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 HMOX2P30519 316 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 PHKG1Q16816 387 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 NHSL2Q5HYW2 709 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 INTS11Q5TA45 600 aaKnown RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 GRAMD4Q6IC98 578 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 MILR1Q7Z6M3 343 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 TMC8Q8IU68 726 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 CMTR2Q8IYT2 770 aaKnown RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 CBARPQ8N350 705 aaPredicted RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 CHCHD4Q8N4Q1 142 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 FIBCD1Q8N539 461 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 DPP10Q8N608 796 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 HTATIP2Q9BUP3 242 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 APOL5Q9BWW9 433 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 LRRC3Q9BY71 257 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 TBX21Q9UL17 535 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 PADI4Q9UM07 663 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 USP22Q9UPT9 525 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 POLR3HQ9Y535 204 aaPredicted RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 SLC4A7Q9Y6M7 1214 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 A0A1B0GTW7 788 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 DYTNA2CJ06 578 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 FAM149AA5PLN7 773 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 NPIPB15A6NHN6 443 aaPredicted RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 INPP4BO15327 924 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 TPST1O60507 370 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 LILRB3O75022 631 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 ENO2P09104 434 aaPredicted RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 ETS2P15036 469 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 FASP25445 335 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 SERPINA4P29622 427 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 FXNQ16595 210 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 CYP51A1Q16850 503 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 AP5B1Q2VPB7 878 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 GPR33Q49SQ1 333 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 NADK2Q4G0N4 442 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 RFTN2Q52LD8 501 aaPredicted RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 HABP4Q5JVS0 413 aaKnown RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 METTL3Q86U44 580 aaKnown RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 NXPE1Q8N323 547 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 PACRGLQ8N7B6 248 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 GPR26Q8NDV2 337 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 TRPV3Q8NET8 790 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 OR2AP1Q8NGE2 309 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 DIS3LQ8TF46 1054 aaKnown RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 UBTD2Q8WUN7 234 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 RHBDF1Q96CC6 855 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 RPL10LQ96L21 214 aaKnown RBP14.32□□□□□ -0.12
TPM3-206ENST00000330188 LYSMD1Q96S90 227 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 EGFL8Q99944 293 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 ANKRD60Q9BZ19 345 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 CD244Q9BZW8 370 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 GRIP2Q9C0E4 1043 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 ZMYM5Q9UJ78 669 aa14.32□□□□□ -0.12
TPM3-206ENST00000330188 AGAP14A8MT82 685 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 PLOD2O00469 737 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 DLGAP1O14490 977 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 RSL1D1O76021 490 aaKnown RBP14.31□□□□□ -0.12
TPM3-206ENST00000330188 SRCP12931 536 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 HTR1EP28566 365 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 CTSOP43234 321 aaPredicted RBP14.31□□□□□ -0.12
TPM3-206ENST00000330188 STK19P49842 368 aaPredicted RBP14.31□□□□□ -0.12
TPM3-206ENST00000330188 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
TPM3-206ENST00000330188 SEMG2Q02383 582 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 CRTC1Q6UUV9 634 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 DLEU7Q6UYE1 221 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 HID1Q8IV36 788 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 CBR4Q8N4T8 237 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 MFSD2AQ8NA29 543 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 LMLNQ96KR4 655 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms