RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 MS4A14Q96JA4 679 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 OR6C1Q96RD1 312 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 ZNF670Q9BS34 389 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 NLNQ9BYT8 704 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 ZDHHC18Q9NUE0 388 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 TMEM160Q9NX00 188 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 MKL2Q9ULH7 1088 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 CHD5Q8TDI0 1954 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 SMPD2O60906 423 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 ECEL1O95672 775 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 IGLV3-25P01717 112 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 IGLV3-27P01718 113 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 C9P02748 559 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 CCNB1P14635 433 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 MAGEA6P43360 314 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 MAP3K7CLP57077 242 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 SLC8A3P57103 927 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 TAS2R40P59535 323 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 CACNG1Q06432 222 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 XRCC4Q13426 336 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 IRF4Q15306 451 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 OASLQ15646 514 aaKnown RBP6.51□□□□□ -1.37
CSTF3-201ENST00000323959 DPYSL2Q16555 572 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 FBLN7Q53RD9 439 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 FAM133BQ5BKY9 247 aaKnown RBP6.51□□□□□ -1.37
CSTF3-201ENST00000323959 SNAP47Q5SQN1 464 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 SLC9A4Q6AI14 798 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 SCARA5Q6ZMJ2 495 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 SPOCD1Q6ZMY3 1216 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 FAM183BPQ6ZVS7 135 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 GPRIN1Q7Z2K8 1008 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 OR1E3Q8WZA6 343 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 CAPZA3Q96KX2 299 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 PRICKLE1Q96MT3 831 aaPredicted RBP6.51□□□□□ -1.37
CSTF3-201ENST00000323959 MCEEQ96PE7 176 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 LMF1Q96S06 567 aa6.51□□□□□ -1.37
CSTF3-201ENST00000323959 DMGDHQ9UI17 866 aaKnown RBP6.51□□□□□ -1.37
CSTF3-201ENST00000323959 PACSIN2Q9UNF0 486 aaPredicted RBP6.51□□□□□ -1.37
CSTF3-201ENST00000323959 ATMINO43313 823 aaPredicted RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 CPNE3O75131 537 aaKnown RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 TM7SF2O76062 418 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 HEXIM1O94992 359 aaKnown RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 ITIH2P19823 946 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 CXCR5P32302 372 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 RFC1P35251 1148 aaPredicted RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 EPHB1P54762 984 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 RPL7AP62424 266 aaKnown RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 DR1Q01658 176 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 SLC25A52Q3SY17 297 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 MIDNQ504T8 468 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 PMF1Q6P1K2 205 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 PRSS42Q7Z5A4 293 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 SPPL2CQ8IUH8 684 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 FATE1Q969F0 183 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 PDXPQ96GD0 296 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 SCARF2Q96GP6 870 aaPredicted RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 SLC38A3Q99624 504 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 NDC1Q9BTX1 674 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 OSBPL8Q9BZF1 889 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 PADI2Q9Y2J8 665 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 UTP11Q9Y3A2 253 aaKnown RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 TRAV17A0A0B4J275 112 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 CFAP69A5D8W1 941 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 PPM1DO15297 605 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 NUDT17P0C025 328 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 ZFXP17010 805 aaPredicted RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 KDELR1P24390 212 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 SOX18P35713 384 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 MARCKSL1P49006 195 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 NR2C2P49116 596 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 CXCR3P49682 368 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 AIMP2Q13155 320 aaKnown RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 CCDC14Q49A88 953 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 ACCSLQ4AC99 568 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 KRTCAP3Q53RY4 240 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 TTC39BQ5VTQ0 682 aaPredicted RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 IRAK1BP1Q5VVH5 260 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 DCUN1D2Q6PH85 259 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 CLEC20AQ6ZU45 233 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 BHLHA9Q7RTU4 235 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 HOOK3Q86VS8 718 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 SFTPA2Q8IWL1 248 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 KLHDC8BQ8IXV7 354 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 ENDOVQ8N8Q3 282 aaKnown RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 OR56A4Q8NGH8 313 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 CASKIN2Q8WXE0 1202 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 LRRC45Q96CN5 670 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 KRT12Q99456 494 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 NPY6RQ99463 290 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 DHRS4Q9BTZ2 278 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 FRMD8Q9BZ67 464 aaPredicted RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 ATP13A2Q9NQ11 1180 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 SPATS2LQ9NUQ6 558 aaKnown RBP6.5□□□□□ -1.37
CSTF3-201ENST00000323959 TAAR2Q9P1P5 351 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 HS3ST2Q9Y278 367 aa6.5□□□□□ -1.37
CSTF3-201ENST00000323959 E5RJQ4 531 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 APOC4-APOC2K7ER74 178 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 LIASO43766 372 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 RNF8O76064 485 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms