RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 HOXD8P13378 290 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-201ENST00000321105 MAPK1P28482 360 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 NSG1P42857 185 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 SH3BP2P78314 561 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 DLG1Q12959 904 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 TRIM25Q14258 630 aaKnown RBP10.84□□□□□ -0.67
TOP3A-201ENST00000321105 LAPTM4AQ15012 233 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 MYLK3Q32MK0 819 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 PTCHD3Q3KNS1 767 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 CARD16Q5EG05 197 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 ANKRD26P1Q6NSI1 321 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 TXNDC11Q6PKC3 985 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 SNX20Q7Z614 316 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 TMEM132CQ8N3T6 1108 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 OR52J3Q8NH60 311 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 SNRNP27Q8WVK2 155 aaKnown RBP10.84□□□□□ -0.67
TOP3A-201ENST00000321105 RAPGEFL1Q9UHV5 662 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 PRPF19Q9UMS4 504 aaKnown RBP10.84□□□□□ -0.67
TOP3A-201ENST00000321105 ITM2BQ9Y287 266 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 TMEM98Q9Y2Y6 226 aa10.84□□□□□ -0.67
TOP3A-201ENST00000321105 ISM1B1AKI9 464 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 SDHDO14521 159 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 CLDN9O95484 217 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 FTH1P02794 183 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 CHRM1P11229 460 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-201ENST00000321105 G6PDP11413 515 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 GM2AP17900 193 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 CCNFP41002 786 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 FPGSQ05932 587 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 DSC3Q14574 896 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 TECRLQ5HYJ1 363 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 FAM180BQ6P0A1 224 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 DSG4Q86SJ6 1040 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 ISCA2Q86U28 154 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 TMEM175Q9BSA9 504 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 DHRS4Q9BTZ2 278 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 SH3GLB1Q9Y371 365 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 WASH3PC4AMC7 463 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 UROSP10746 265 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 EPCAMP16422 314 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 AOC1P19801 751 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 TIE1P35590 1138 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 GRK3P35626 688 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 SIM2Q14190 667 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-201ENST00000321105 XKR4Q5GH76 650 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 ZNF678Q5SXM1 525 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 GDPD4Q6W3E5 623 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 PGBD5Q8N414 524 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 CSGALNACT1Q8TDX6 532 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 LINC01599Q8WXQ3 324 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 WBP2Q969T9 261 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 CLIP3Q96DZ5 547 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 SH3GL1Q99961 368 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 CCDC28BQ9BUN5 200 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 MARCH5Q9NX47 278 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 TBC1D14Q9P2M4 693 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 ZDBF2Q9HCK1 2354 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 C15orf38-AP3S2A0A0A6YYH1 394 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-201ENST00000321105 TTC34A8MYJ7 566 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 TNFRSF10BO14763 440 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 TGFB1P01137 390 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 DHRS4L1P0CG22 281 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 DDX5P17844 614 aaKnown RBP10.83□□□□□ -0.68
TOP3A-201ENST00000321105 RING1Q06587 406 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 DSC1Q08554 894 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 GPM6BQ13491 265 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 CCDC85BQ15834 202 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-201ENST00000321105 GPRC6AQ5T6X5 926 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 C22orf39Q6P5X5 142 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 RFLNAQ6ZTI6 216 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 LPCAT2Q7L5N7 544 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 ARPINQ7Z6K5 226 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 OR13J1Q8NGT2 312 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 NT5C3BQ969T7 300 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 RNF31Q96EP0 1072 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 PTCD3Q96EY7 689 aaKnown RBP10.83□□□□□ -0.68
TOP3A-201ENST00000321105 MAGEB10Q96LZ2 347 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-201ENST00000321105 SORT1Q99523 831 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 COQ10BQ9H8M1 238 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 PLAGL1Q9UM63 463 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 TBC1D30Q9Y2I9 924 aa10.83□□□□□ -0.68
TOP3A-201ENST00000321105 KERAO60938 352 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 VPS4BO75351 444 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 DIRAS1O95057 198 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 IFNA8P32881 189 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 LEPRP48357 1165 aaKnown RBP10.82□□□□□ -0.68
TOP3A-201ENST00000321105 CLK1P49759 484 aaKnown RBP10.82□□□□□ -0.68
TOP3A-201ENST00000321105 PLA2G16P53816 162 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 MAD2L1Q13257 205 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-201ENST00000321105 ATP13A5Q4VNC0 1218 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 DCAF4L2Q8NA75 395 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 MDGA1Q8NFP4 955 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 CLP1Q92989 425 aaKnown RBP10.82□□□□□ -0.68
TOP3A-201ENST00000321105 KLHL25Q9H0H3 589 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 MIR1-1HGQ9H1L0 117 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 TFB2MQ9H5Q4 396 aaKnown RBP10.82□□□□□ -0.68
TOP3A-201ENST00000321105 DNAJC11Q9NVH1 559 aa10.82□□□□□ -0.68
TOP3A-201ENST00000321105 INTS10Q9NVR2 710 aaKnown RBP10.82□□□□□ -0.68
TOP3A-201ENST00000321105 MCM8Q9UJA3 840 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms