RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TIFABQ6ZNK6 161 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 SH2D5Q6ZV89 423 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 SFTPA2Q8IWL1 248 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 CCDC63Q8NA47 563 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 OR2I1PQ8NGU4 316 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 TCP10LQ8TDR4 215 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 C1QTNF1Q9BXJ1 281 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 ALG9Q9H6U8 611 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 COG4Q9H9E3 785 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 TMEM216Q9P0N5 145 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 PILRBQ9UKJ0 227 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 GPR34Q9UPC5 381 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 ANKRD6Q9Y2G4 727 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 SNX11Q9Y5W9 270 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 COMMD10Q9Y6G5 202 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 TMEM120BA0PK00 339 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 CDC7O00311 574 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 MPOP05164 745 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 CTSEP14091 401 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 OAS2P29728 719 aaKnown RBP15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 ACTR1BP42025 376 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 MAGEA12P43365 314 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 GYS2P54840 703 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 ACTR1AP61163 376 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 MPP2Q14168 576 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 KIF19Q2TAC6 998 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 N4BP2L1Q5TBK1 243 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 TCEAL6Q6IPX3 200 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 DUS1LQ6P1R4 473 aaKnown RBP15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 PHACTR4Q8IZ21 702 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 BANPQ8N9N5 519 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 OR2L2Q8NH16 312 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 INPP5DQ92835 1189 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 TCEAL3Q969E4 200 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 APOPT1Q96IL0 206 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 ZNF514Q96K75 400 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 FAM111AQ96PZ2 611 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 ARRDC1-AS1Q9H2J1 176 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 PRDM8Q9NQV8 689 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 ACSS2Q9NR19 701 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 IGSF5Q9NSI5 407 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 CDYLQ9Y232 598 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 WDR37Q9Y2I8 494 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 GPR179Q6PRD1 2367 aa15.1■□□□□ 0.01
PDLIM5-202ENST00000318007 MGAT4DA6NG13 374 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 PDZK1P1A8MUH7 402 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 HMGB1P1B2RPK0 211 aaPredicted RBP15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 QSOX1O00391 747 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 EML2O95834 649 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 TSPAN12O95859 305 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 TNFP01375 233 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 TFEBP19484 476 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 SKIV2L2P42285 1042 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 NXPH1P58417 271 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 TSNQ15631 228 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 TTLL9Q3SXZ7 439 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 XKR5Q6UX68 686 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 C11orf74Q86VG3 221 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 ASZ1Q8WWH4 475 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 ISL2Q96A47 359 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 PTERQ96BW5 349 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 TSNARE1Q96NA8 513 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 MED4Q9NPJ6 270 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 XPR1Q9UBH6 696 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 ADAMTS6Q9UKP5 1117 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 CACNA1HO95180 2353 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 A0A087X1B8 175 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 A0A1B0GTW7 788 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 WDR91A4D1P6 747 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 OR52A4PA6NMU1 304 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 H3BM21 787 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 LTA4HP09960 611 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 DGKAP23743 735 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 CNR2P34972 360 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 CSRP3P50461 194 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 CLCNKAP51800 687 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 SYT12Q8IV01 421 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 MYO1HQ8N1T3 1032 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 ARMC2Q8NEN0 867 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 ZC3H10Q96K80 434 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 LRRC61Q9BV99 259 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 SYTL2Q9HCH5 934 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 GPR27Q9NS67 375 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 TP53BP1Q12888 1972 aaPredicted RBP15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 ADAMTS9Q9P2N4 1935 aa15.09■□□□□ 0.01
PDLIM5-202ENST00000318007 TMEM131Q92545 1883 aa15.08■□□□□ 0.01
PDLIM5-202ENST00000318007 TNRC6BQ9UPQ9 1833 aaKnown RBP15.08■□□□□ 0
PDLIM5-202ENST00000318007 LRP4O75096 1905 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 PRAMEF33A0A0G2JMD5 474 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 KLHL2O95198 593 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 GUCA1CO95843 209 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 HOXC4P09017 264 aaPredicted RBP15.08■□□□□ 0
PDLIM5-202ENST00000318007 CD1DP15813 335 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 NR1D1P20393 614 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 CCNFP41002 786 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 CCT5P48643 541 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 SLC18A2Q05940 514 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 DNAJC3Q13217 504 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 TEAD4Q15561 434 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 OR4D1Q15615 310 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms