RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
NPAS4-201ENST00000311034 ACTR8Q9H981 624 aa13.38□□□□□ -0.27
NPAS4-201ENST00000311034 RASSF1Q9NS23 344 aa13.38□□□□□ -0.27
NPAS4-201ENST00000311034 TRMT13Q9NUP7 481 aaKnown RBP13.38□□□□□ -0.27
NPAS4-201ENST00000311034 COL1A2P08123 1366 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 SSC5DA1L4H1 1573 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 NTRK1P04629 796 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 RAP2AP10114 183 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 UMPSP11172 480 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 KCNE1P15382 129 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 SERPINB1P30740 379 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 EEFSECP57772 596 aaKnown RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 NCS1P62166 190 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 RPL38P63173 70 aaKnown RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 GALNT1Q10472 559 aaPredicted RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 MAPRE1Q15691 268 aaKnown RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 CPSF6Q16630 551 aaKnown RBP eCLIP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 GPRIN3Q6ZVF9 776 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 RBM23Q86U06 439 aaKnown RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 PROSER1Q86XN7 944 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 HID1Q8IV36 788 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 RTL3Q8N8U3 475 aaKnown RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 CHDHQ8NE62 594 aaPredicted RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 CAPSLQ8WWF8 208 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 BRI3BPQ8WY22 251 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 TUBA1CQ9BQE3 449 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 CARS2Q9HA77 564 aaKnown RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 TAS2R13Q9NYV9 303 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 MAGEL2Q9UJ55 1249 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 PKP3Q9Y446 797 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 SYNDIG1LA6NDD5 238 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 ARVCFO00192 962 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 FGF10O15520 208 aaPredicted RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 AQP9O43315 295 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 CPNE6O95741 557 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 ZNF157P51786 506 aaPredicted RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 DUSP4Q13115 394 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 ARHGEF7Q14155 803 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 IHHQ14623 411 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 TRIP4Q15650 581 aaPredicted RBP13.37□□□□□ -0.27
NPAS4-201ENST00000311034 C6orf136Q5SQH8 315 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 STON2Q8WXE9 905 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 ASB2Q96Q27 587 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 MAF1Q9H063 256 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 ERVK-18Q9QC07 812 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 POU2F3Q9UKI9 436 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 PADI3Q9ULW8 664 aa13.37□□□□□ -0.27
NPAS4-201ENST00000311034 SH3BP5O60239 455 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 FKBP9O95302 570 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 MATN4O95460 622 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 SEC24AO95486 1093 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 CAPN1P07384 714 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 FDXRP22570 491 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 PTGR1Q14914 329 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 FKBP9P1Q75LS8 142 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 ZNF280BQ86YH2 543 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 SLC35B4Q969S0 331 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 CGREF1Q99674 301 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 RHNO1Q9BSD3 238 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 AMBRA1Q9C0C7 1298 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 MARCH7Q9H992 704 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 MRM3Q9HC36 420 aaKnown RBP13.36□□□□□ -0.27
NPAS4-201ENST00000311034 HHLA1C9JL84 531 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 H0YAE9 185 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 GABRDO14764 452 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 EEDO75530 441 aaKnown RBP13.36□□□□□ -0.27
NPAS4-201ENST00000311034 ODC1P11926 461 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 CYP4F2P78329 520 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 FAM189BP81408 668 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 CYP4F3Q08477 520 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 USP51Q70EK9 711 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 BHLHA9Q7RTU4 235 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 GLT6D1Q7Z4J2 308 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 SPATA19Q7Z5L4 167 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 DENND1CQ8IV53 801 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
NPAS4-201ENST00000311034 COLGALT2Q8IYK4 626 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 PYCR2Q96C36 320 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 IMP4Q96G21 291 aaKnown RBP13.36□□□□□ -0.27
NPAS4-201ENST00000311034 ATOH8Q96SQ7 321 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 KATNAL1Q9BW62 490 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 GPR63Q9BZJ6 419 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 C6orf62Q9GZU0 229 aaPredicted RBP13.36□□□□□ -0.27
NPAS4-201ENST00000311034 SIAEQ9HAT2 523 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 VTA1Q9NP79 307 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 TLR9Q9NR96 1032 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 FAM32AQ9Y421 112 aaKnown RBP13.36□□□□□ -0.27
NPAS4-201ENST00000311034 DNAH14Q0VDD8 3507 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 SOBPA7XYQ1 873 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 PSMD11O00231 422 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 STX7O15400 261 aaKnown RBP13.36□□□□□ -0.27
NPAS4-201ENST00000311034 ANGPTL1O95841 491 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 GSTM2P28161 218 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 GATMP50440 423 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 GRSF1Q12849 480 aaKnown RBP eCLIP13.36□□□□□ -0.27
NPAS4-201ENST00000311034 TAF10Q12962 218 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 GTDC1Q4AE62 458 aa13.36□□□□□ -0.27
NPAS4-201ENST00000311034 CTXN3Q4LDR2 81 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms