RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CSF2P04141 144 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 IGFALSP35858 605 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 PRKAA2P54646 552 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 MPP2Q14168 576 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 NT5DC1Q5TFE4 455 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 BEND4Q6ZU67 534 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 PIM3Q86V86 326 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 MYO19Q96H55 970 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 SOX17Q9H6I2 414 aaPredicted RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 ACTL7BQ9Y614 415 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 MYH6P13533 1939 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 ZNF208O43345 1280 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 TULP3O75386 442 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 VNN2O95498 520 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 GCNT6Q5T4J0 391 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 BOLLQ8N9W6 283 aaKnown RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 OR5T1Q8NG75 326 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 AP2M1Q96CW1 435 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 OXCT2Q9BYC2 517 aaPredicted RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 SH3BGRL2Q9UJC5 107 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 DHFRP00374 187 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 NR2F6P10588 404 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 VBP1P61758 197 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 SMAD3P84022 425 aaKnown RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 KCTD9Q7L273 389 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 PTF1AQ7RTS3 328 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 THAP5Q7Z6K1 395 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 SLC22A15Q8IZD6 547 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 CENPSQ8N2Z9 138 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 METTL27Q8N6F8 245 aaPredicted RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 OSBPL2Q9H1P3 480 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 METTL8Q9H825 291 aaKnown RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 GPN1Q9HCN4 374 aaPredicted RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 MRPS23Q9Y3D9 190 aaKnown RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 H3BSA7 217 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 CCNOP22674 350 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 ZDHHC20Q5W0Z9 365 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 ZDHHC17Q8IUH5 632 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 FAM71AQ8IYT1 594 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 ADAMTS15Q8TE58 950 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 ELOVL7A1L3X0 281 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 PAEPP09466 180 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 RPS9P46781 194 aaKnown RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 PRKCDQ05655 676 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 NFE2Q16621 373 aaPredicted RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 DCST1Q5T197 706 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 ATAD1Q8NBU5 361 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 OR7D4Q8NG98 312 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 OR14C36Q8NHC7 312 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 C2orf49Q9BVC5 232 aaPredicted RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 UROSP10746 265 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 IL7RP16871 459 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 ECHS1P30084 290 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 BNIP2Q12982 314 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 AMZ1Q400G9 498 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 PRAMEF17Q5VTA0 474 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 DLK2Q6UY11 383 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 CTU1Q7Z7A3 348 aaKnown RBP12.49□□□□□ -0.41
USP38-201ENST00000307017 P2RY8Q86VZ1 359 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 PEX5LQ8IYB4 626 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 ENOPH1Q9UHY7 261 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 MBD5Q9P267 1494 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 RNASEH2AO75792 299 aaKnown RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 C8orf89P0DMQ9 161 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 CORO1AP31146 461 aaKnown RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 ZNF267Q14586 743 aaPredicted RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 ARSHQ5FYA8 562 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 RTL4Q6ZR62 310 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 XYLT1Q86Y38 959 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 ASPNQ9BXN1 380 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 SPIN3Q5JUX0 258 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 TRMT10BQ6PF06 316 aaKnown RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 CCDC80Q76M96 950 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 CPNE9Q8IYJ1 553 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 JPH3Q8WXH2 748 aaPredicted RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 MYEF2Q9P2K5 600 aaKnown RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 CKLFQ9UBR5 152 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 ATXN7L1Q9ULK2 861 aaPredicted RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 E9PCH4 1651 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 SERPINB7O75635 380 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 MRPL3P09001 348 aaKnown RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 ANXA4P09525 319 aaPredicted RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 C1orf189Q5VU69 101 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 ZBTB2Q8N680 514 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 POGLUT1Q8NBL1 392 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 MCCC1Q96RQ3 725 aaPredicted RBP12.48□□□□□ -0.41
USP38-201ENST00000307017 CXorf21Q9HAI6 301 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 MARK1Q9P0L2 795 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 GRXCR1A8MXD5 290 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 CCNB2O95067 398 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 TGFB1P01137 390 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 UGT1A6P19224 532 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 UGT1A1P22309 533 aa12.48□□□□□ -0.41
USP38-201ENST00000307017 UGT1A4P22310 534 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms