RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 IDSP22304 550 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 SDC2P34741 201 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 WASP42768 502 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 MTTPP55157 894 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 RGS8P57771 180 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-201ENST00000303531 MTPNP58546 118 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 DEFB115Q30KQ5 88 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 GTPBP3Q969Y2 492 aaKnown RBP13.76□□□□□ -0.21
PRKCB-201ENST00000303531 FAXDC2Q96IV6 333 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 PIGUQ9H490 435 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 TMEM27Q9HBJ8 222 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 PRPS2P11908 318 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 EFNA1P20827 205 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-201ENST00000303531 IL1R2P27930 398 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 CHRNA4P43681 627 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 HSPB3Q12988 150 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 ACSBG2Q5FVE4 666 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 NKIRAS2Q9NYR9 191 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 DHRS7Q9Y394 339 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 DUSP11O75319 330 aaKnown RBP13.76□□□□□ -0.21
PRKCB-201ENST00000303531 PRNPP04156 253 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 PCDH1Q08174 1060 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 KCTD8Q6ZWB6 473 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 JAZF1Q86VZ6 243 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 ZZZ3Q8IYH5 903 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 TTC29Q8NA56 475 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-201ENST00000303531 SLC35B2Q8TB61 432 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 TRBV23OR9-2A0A075B6M9 112 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 EPHX1P07099 455 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 POU2F1P14859 743 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 KLF1Q13351 362 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-201ENST00000303531 FAAH2Q6GMR7 532 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 PDPRQ8NCN5 879 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 SLC13A3Q8WWT9 602 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 KLHL32Q96NJ5 620 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 MCCC1Q96RQ3 725 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-201ENST00000303531 INTS10Q9NVR2 710 aaKnown RBP13.76□□□□□ -0.21
PRKCB-201ENST00000303531 C1orf109Q9NX04 203 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 IKZF2Q9UKS7 526 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 ZNF541Q9H0D2 1346 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 POP4O95707 220 aaKnown RBP13.76□□□□□ -0.21
PRKCB-201ENST00000303531 DHFRP00374 187 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 NOGQ13253 232 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 POMZP3Q6PJE2 187 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 FEM1AQ9BSK4 669 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 ZNF358Q9NW07 568 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 CCNKO75909 580 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 NT5EP21589 574 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 MADCAM1Q13477 382 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 ZDHHC21Q8IVQ6 265 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 PLD4Q96BZ4 506 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 C11orf24Q96F05 449 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 NECTIN3Q9NQS3 549 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 RNASEH2AO75792 299 aaKnown RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 APODP05090 189 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 ATXN7L2Q5T6C5 722 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 SCAMP5Q8TAC9 235 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 EXO5Q9H790 373 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 TEX28O15482 410 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 AIREO43918 545 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 CCNB2O95067 398 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 SNAP47Q5SQN1 464 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 OLFML2AQ68BL7 652 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 TMEM192Q8IY95 271 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 CPA6Q8N4T0 437 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 MEIOBQ8N635 442 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 ARL14EPQ8N8R7 260 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 DCAKDQ8WVC6 231 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 C11orf16Q9NQ32 467 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 PMM2O15305 246 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 NOBOXO60393 691 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 TCEA3O75764 348 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 RLN1P04808 185 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 NRLP54845 237 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 ZNF155Q12901 538 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 SOWAHAQ2M3V2 549 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 ATP13A5Q4VNC0 1218 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 KLHL35Q6PF15 583 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 GET4Q7L5D6 327 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 ZNF433Q8N7K0 673 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 SRFBP1Q8NEF9 429 aaKnown RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 SLC38A4Q969I6 547 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 CACNG4Q9UBN1 327 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 C9IYK1 514 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 GABRDO14764 452 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 SLC22A2O15244 555 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 KERAO60938 352 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 GJA9P57773 515 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 PRKD1Q15139 912 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 CADM2Q8N3J6 435 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 MRTO4Q9UKD2 239 aaKnown RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 CPQQ9Y646 472 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 C8GP07360 202 aa13.75□□□□□ -0.21
PRKCB-201ENST00000303531 RPS14P62263 151 aaKnown RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 PTGES3Q15185 160 aaKnown RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 RPL10LQ96L21 214 aaKnown RBP13.75□□□□□ -0.21
PRKCB-201ENST00000303531 NSMCE3Q96MG7 304 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms