RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 ANGPTL1O95841 491 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ANXA5P08758 320 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 COX7A2P14406 83 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ICAM3P32942 547 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CD81P60033 236 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MTAPQ13126 283 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 UNC5DQ6UXZ4 953 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 FRMD7Q6ZUT3 714 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 DGLUCYQ7Z3D6 616 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 PTAR1Q7Z6K3 402 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 GPR180Q86V85 440 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 TRPM4Q8TD43 1214 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MARVELD3Q96A59 401 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF597Q96LX8 424 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 RSPH9Q9H1X1 276 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 PLEKHA1Q9HB21 404 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 OPTCQ9UBM4 332 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 IKZF3Q9UKT9 509 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ATRNL1Q5VV63 1379 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SLC9A3R1O14745 358 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 APBA3O96018 575 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ZSCAN5DPP0CG00 497 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CTSEP14091 401 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ATP6V1B2P21281 511 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 KLRC2P26717 231 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 UQCRC1P31930 480 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 PSMD8P48556 350 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ALDH7A1P49419 539 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 EIPR1Q53HC9 387 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 TSTD2Q5T7W7 516 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 PIK3R6Q5UE93 754 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 LRRN1Q6UXK5 716 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 Q6ZNX1 250 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 IFNEQ86WN2 208 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MARCH10Q8NA82 808 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 HIST1H2AAQ96QV6 131 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 PPP1R16BQ96T49 567 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 RAB11FIP5Q9BXF6 653 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 RC3H2Q9HBD1 1191 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 NANSQ9NR45 359 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MRTO4Q9UKD2 239 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CA5BQ9Y2D0 317 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF407Q9C0G0 2248 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 A0A1W2PP18 115 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ELOVL7A1L3X0 281 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 E2F3O00716 465 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SPTLC1O15269 473 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 NOL4O94818 638 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MICAL2O94851 1124 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SLITRK5O94991 958 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MBL2P11226 248 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 RBL1P28749 1068 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 HALP42357 657 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CACNB1Q02641 598 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 GPR33Q49SQ1 333 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ADNP2Q6IQ32 1131 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 KBTBD6Q86V97 674 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 RAVER1Q8IY67 606 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 NSMCE3Q96MG7 304 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 RUSC1Q9BVN2 902 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 POLR2J2Q9GZM3 115 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 POLR2J3Q9H1A7 115 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CHMP1AQ9HD42 196 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 LYVE1Q9Y5Y7 322 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 DOCK8Q8NF50 2099 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 C5orf51A6NDU8 294 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 E7ENX8 843 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 FBP2O00757 339 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 LATO43561 262 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SNNO75324 88 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 DLDP09622 509 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 GIMD1P0DJR0 217 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 GNPDA1P46926 289 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 NDST2P52849 883 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 INHBCP55103 352 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 PGS1Q32NB8 556 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 RAB41Q5JT25 222 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CLVS2Q5SYC1 327 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 AGAP7PQ5VUJ5 663 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ACSM2BQ68CK6 577 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 KLHDC10Q6PID8 442 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF783Q6ZMS7 281 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF782Q6ZMW2 699 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 PLEKHG7Q6ZR37 379 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 TIGD4Q8IY51 512 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ELMO1Q92556 727 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MED8Q96G25 268 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 LRFN5Q96NI6 719 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 GAREM1Q9H706 876 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SNX15Q9NRS6 342 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ABCC13Q9NSE7 274 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SOHLH2Q9NX45 425 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 EXOSC1Q9Y3B2 195 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 AKAP6Q13023 2319 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 OR56A5P0C7T3 313 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 KCNC4Q03721 635 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF630Q2M218 657 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 SLC25A52Q3SY17 297 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 KHDC1Q4VXA5 237 aaKnown RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 FAM182AQ5T1J6 154 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms