RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CLCN7P51798 805 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 KIAA0408Q6ZU52 694 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 KANSL1Q7Z3B3 1105 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 COX18Q8N8Q8 333 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 TXNDC5Q8NBS9 432 aaKnown RBP7.7□□□□□ -1.18
SCN9A-201ENST00000303354 TWIST2Q8WVJ9 160 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 OVCA2Q8WZ82 227 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 RADILQ96JH8 1075 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 MRPS26Q9BYN8 205 aaKnown RBP7.7□□□□□ -1.18
SCN9A-201ENST00000303354 RACGAP1Q9H0H5 632 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 CDH19Q9H159 772 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 LMTK2Q8IWU2 1503 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 MAGEA13PA6NCF6 341 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 CENPXA8MT69 81 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 C9J4A7 227 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 SYN3O14994 580 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF208O43345 1280 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 DAOAP59103 153 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 TAS2R50P59544 299 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 CDC42P60953 191 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 PHF13Q86YI8 300 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-201ENST00000303354 STYXQ8WUJ0 223 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF607Q96SK3 696 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF670Q9BS34 389 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 FAM149AA5PLN7 773 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 NIPSNAP2O75323 286 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 CA3P07451 260 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 SLC6A9P48067 706 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 MON1BQ7L1V2 547 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 PIWIL4Q7Z3Z4 852 aaKnown RBP7.7□□□□□ -1.18
SCN9A-201ENST00000303354 REM2Q8IYK8 340 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-201ENST00000303354 CELF5Q8N6W0 485 aaKnown RBP7.7□□□□□ -1.18
SCN9A-201ENST00000303354 DDHD1Q8NEL9 900 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 TRAF6Q9Y4K3 522 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 G3V2T6 193 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 PRMT5O14744 637 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-201ENST00000303354 CLDN9O95484 217 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 ATP6V1G2O95670 118 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 ASGR2P07307 311 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 RHOQP17081 205 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 PAOXQ6QHF9 649 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 PEG10Q86TG7 708 aaKnown RBP7.7□□□□□ -1.18
SCN9A-201ENST00000303354 CCNL2Q96S94 520 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-201ENST00000303354 VWDEQ8N2E2 1590 aa7.7□□□□□ -1.18
SCN9A-201ENST00000303354 CAMTA1Q9Y6Y1 1673 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 CLEC3AO75596 197 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 HNMTP50135 292 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 CACNA2D1P54289 1103 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 CLEC12AQ5QGZ9 265 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 FAM92BQ6ZTR7 304 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 LYSMD3Q7Z3D4 306 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 ADAMTSL2Q86TH1 951 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 FAM156AQ8NDB6 213 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 COQ8BQ96D53 544 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 VIPAS39Q9H9C1 493 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 MARK1Q9P0L2 795 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 POU2F3Q9UKI9 436 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 A0A0U1RQS6 177 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SNAPC1Q16533 368 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 INTS11Q5TA45 600 aaKnown RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 LIPMQ5VYY2 423 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 INPP4AQ96PE3 977 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 HHIPQ96QV1 700 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SUV39H2Q9H5I1 410 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 TBC1D30Q9Y2I9 924 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 FAM58BPP0C7Q3 252 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 IL7RP16871 459 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 TPP2P29144 1249 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 RCVRNP35243 200 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 GRIA1P42261 906 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 GDF5P43026 501 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 CCR10P46092 362 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 BST1Q10588 318 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 INO80DQ53TQ3 878 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PERM1Q5SV97 790 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 ENKURQ8TC29 256 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SPATA5L1Q9BVQ7 753 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 METTL7AQ9H8H3 244 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 RXFP1Q9HBX9 757 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PDP1Q9P0J1 537 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PCDHGA6Q9Y5G7 932 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 C2orf78A6NCI8 922 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 KLK3P07288 261 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 RHOP08100 348 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PSME3P61289 254 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 CSTF1Q05048 431 aaKnown RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SHISA6Q6ZSJ9 500 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PIH1D2Q8WWB5 315 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PLEKHA1Q9HB21 404 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 ANKHQ9HCJ1 492 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 FBXW11Q9UKB1 542 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 ACTL7AQ9Y615 435 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 GDF10P55107 478 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SLC10A7Q0GE19 358 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 ADGRE1Q14246 886 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 OAFQ86UD1 273 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 ANKFN1Q8N957 763 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 KBTBD7Q8WVZ9 684 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 OR51B6Q9H340 312 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SLC2A6Q9UGQ3 507 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms