RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CLCA4Q14CN2 919 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 SOWAHCQ53LP3 525 aaPredicted RBP14.46□□□□□ -0.09
COL6A2-201ENST00000300527 SDHAF4Q5VUM1 108 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 STEAP3Q658P3 488 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 MOB2Q70IA6 237 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 PAPD5Q8NDF8 572 aaKnown RBP14.46□□□□□ -0.09
COL6A2-201ENST00000300527 PTCD2Q8WV60 388 aaKnown RBP14.46□□□□□ -0.09
COL6A2-201ENST00000300527 PROX1Q92786 737 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 PSMG2Q969U7 264 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 MTFMTQ96DP5 389 aaKnown RBP14.46□□□□□ -0.09
COL6A2-201ENST00000300527 HMCESQ96FZ2 354 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 ZNF486Q96H40 463 aaPredicted RBP14.46□□□□□ -0.09
COL6A2-201ENST00000300527 NACA2Q9H009 215 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 IKZF5Q9H5V7 419 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 PCDHB14Q9Y5E9 798 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 SNX8Q9Y5X2 465 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 TYW5A2RUC4 315 aaKnown RBP14.46□□□□□ -0.1
COL6A2-201ENST00000300527 hCG_2039718K7EN88 272 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 NDUFS3O75489 264 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 SERPINA1P01009 418 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 FGF4P08620 206 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 PGFP49763 221 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 ISL1P61371 349 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 ERVK-8P63133 956 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 DAB2P98082 770 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 AP5B1Q2VPB7 878 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 FAM174BQ3ZCQ3 159 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 CELF2-AS1Q8N7Q2 184 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 KCTD13Q8WZ19 329 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 KIF17Q9P2E2 1029 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 FBXO10Q9UK96 956 aa14.46□□□□□ -0.1
COL6A2-201ENST00000300527 FAM92AA1XBS5 289 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 CYP7B1O75881 506 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 PRSS23O95084 383 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 ITIH1P19827 911 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 DCTP40126 519 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 PHC1P78364 1004 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 RAD51Q06609 339 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 LRIT3Q3SXY7 679 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 CYP20A1Q6UW02 462 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 TMEM40Q8WWA1 233 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 LPPQ93052 612 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 MYLPFQ96A32 169 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 EXOC2Q96KP1 924 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 TSGA13Q96PP4 275 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 ASB2Q96Q27 587 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 ATOH8Q96SQ7 321 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 SLC52A3Q9NQ40 469 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF639Q9UID6 485 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 ANKRD34BA5PLL1 514 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 CXCR6O00574 342 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 USP2O75604 605 aaPredicted RBP14.45□□□□□ -0.1
COL6A2-201ENST00000300527 GABARAPO95166 117 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 MZF1P28698 734 aaPredicted RBP14.45□□□□□ -0.1
COL6A2-201ENST00000300527 PTPRNQ16849 979 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 FAM214AQ32MH5 1076 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 BEND5Q7L4P6 421 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 SEMA3CQ99985 751 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 RNF167Q9H6Y7 350 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 CATSPERZQ9NTU4 200 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 C14orf119Q9NWQ9 140 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 TBC1D14Q9P2M4 693 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 DERAQ9Y315 318 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 CEP350Q5VT06 3117 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 SLC7A4O43246 635 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 KCNK2O95069 426 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 GGT1P19440 569 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 MASP1P48740 699 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 CDKN1CP49918 316 aaPredicted RBP14.45□□□□□ -0.1
COL6A2-201ENST00000300527 AIF1P55008 147 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 HMGCS1Q01581 520 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 IFITM2Q01629 132 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 TOP3AQ13472 1001 aaPredicted RBP14.45□□□□□ -0.1
COL6A2-201ENST00000300527 B3GNT8Q7Z7M8 397 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 ADHFE1Q8IWW8 467 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 SIX5Q8N196 739 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 SIDT2Q8NBJ9 832 aaKnown RBP14.45□□□□□ -0.1
COL6A2-201ENST00000300527 RMDN1Q96DB5 314 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF583Q96ND8 569 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 ZBTB18Q99592 522 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 FAM124BQ9H5Z6 455 aaPredicted RBP14.45□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF225Q9UK10 706 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 TPRKBQ9Y3C4 175 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 PCDHGA10Q9Y5H3 936 aa14.45□□□□□ -0.1
COL6A2-201ENST00000300527 MCM3APO60318 1980 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 ILVBLA1L0T0 632 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 TTC34A8MYJ7 566 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 SSX4O60224 188 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 NIPSNAP2O75323 286 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 CYP11A1P05108 521 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 PCMT1P22061 227 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 EPHA2P29317 976 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 RACK1P63244 317 aaKnown RBP14.44□□□□□ -0.1
COL6A2-201ENST00000300527 MAPKAPK3Q16644 382 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 PM20D1Q6GTS8 502 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 TIGD7Q6NT04 549 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-201ENST00000300527 KDELC1Q6UW63 502 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 NECAB2Q7Z6G3 386 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 ATG16L2Q8NAA4 619 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 OR56A4Q8NGH8 313 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms