RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 HTRA1Q92743 480 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 TMEM125Q96AQ2 219 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 MTFMTQ96DP5 389 aaKnown RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 FUBP3Q96I24 572 aaKnown RBP eCLIP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 CHID1Q9BWS9 393 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ANKRD60Q9BZ19 345 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ABCG8Q9H221 673 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ADNPQ9H2P0 1102 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ZFC3H1O60293 1989 aaKnown RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ZNF236Q9UL36 1845 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 NUP214P35658 2090 aaPredicted RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 A0A087WXM4 84 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 H0Y626 953 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 TAF4O00268 1085 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 TRIM16O95361 564 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 CYBAP13498 195 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 MATN1P21941 496 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 LPOP22079 712 aaPredicted RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 OPRL1P41146 370 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 GDF5P43026 501 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 CLK3P49761 638 aaKnown RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ATP4BP51164 291 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 NFKB2Q00653 900 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 BNIP2Q12982 314 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ZNF177Q13360 481 aaPredicted RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 E2F2Q14209 437 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 INAVAQ3KP66 663 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 GLYATQ6IB77 296 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 HACD2Q6Y1H2 254 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 STK32CQ86UX6 486 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 FAM126BQ8IXS8 530 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 RHEBL1Q8TAI7 183 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 FBXO30Q8TB52 745 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 SGCDQ92629 289 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ACDQ96AP0 544 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 THUMPD3Q9BV44 507 aaKnown RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 GPR63Q9BZJ6 419 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ING2Q9H160 280 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 MIR1-1HGQ9H1L0 117 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ZFP14Q9HCL3 533 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ARMC1Q9NVT9 282 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 MED16Q9Y2X0 877 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ANGPTL3Q9Y5C1 460 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 SEPT4O43236 478 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 SLC2A4P14672 509 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 OGNP20774 298 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 IL12AP29459 219 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 ATP5C1P36542 298 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 SGSHP51688 502 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 HK3P52790 923 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 LSM3P62310 102 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 PRKCZQ05513 592 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 TNK2Q07912 1038 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 SETMARQ53H47 684 aaPredicted RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 C6orf136Q5SQH8 315 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 RNF219Q5W0B1 726 aaPredicted RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 SLC38A6Q8IZM9 456 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 STON2Q8WXE9 905 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 ZUFSPQ96AP4 578 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 BIRC7Q96CA5 298 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 NSMCE2Q96MF7 247 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 ZNF599Q96NL3 588 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 NPLQ9BXD5 320 aaPredicted RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 DERL2Q9GZP9 239 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 OLA1Q9NTK5 396 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 DNMT3BQ9UBC3 853 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 LEF1Q9UJU2 399 aaPredicted RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 CARD8Q9Y2G2 431 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 CPQQ9Y646 472 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 OAS3Q9Y6K5 1087 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 IGLV3-10A0A075B6K4 115 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 MTMR11A4FU01 709 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 AXIN1O15169 862 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 WISP3O95389 354 aaPredicted RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 HOXD9P28356 352 aaPredicted RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 SLC11A2P49281 568 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 RAD23AP54725 363 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 PTRHD1Q6GMV3 140 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 ALDH16A1Q8IZ83 802 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 NKAPQ8N5F7 415 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 CLDN19Q8N6F1 224 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 CLHC1Q8NHS4 586 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 MYRFLQ96LU7 910 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 TP63Q9H3D4 680 aaPredicted RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 PARVBQ9HBI1 364 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 AGPAT4Q9NRZ5 378 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 DDX28Q9NUL7 540 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 DKK3Q9UBP4 350 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 AFF4Q9UHB7 1163 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 POLR3HQ9Y535 204 aaPredicted RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 SLC30A1Q9Y6M5 507 aa13.25□□□□□ -0.29
CTDP1-202ENST00000299543 MKI67P46013 3256 aaKnown RBP13.25□□□□□ -0.29
CTDP1-202ENST00000299543 GSTA4O15217 222 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ACSL4O60488 711 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 UROSP10746 265 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 CHRNB1P11230 501 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms