RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GALNT7Q86SF2 657 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 KYQ8NBH2 561 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 OR6C4Q8NGE1 309 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 DCAKDQ8WVC6 231 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 C1QTNF7Q9BXJ2 289 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 LRRN3Q9H3W5 708 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 GEMIN8Q9NWZ8 242 aaKnown RBP20.76■□□□□ 0.91
SMCO4-201ENST00000298966 CTNNAL1Q9UBT7 734 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 NBASA2RRP1 2371 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 TEX15Q9BXT5 2789 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 ZNF106Q9H2Y7 1883 aaKnown RBP20.75■□□□□ 0.91
SMCO4-201ENST00000298966 A0A1W2PQM1 296 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 FAM155BO75949 473 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 PIGNO95427 931 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 CELA2BP08218 269 aaPredicted RBP20.75■□□□□ 0.91
SMCO4-201ENST00000298966 GP5P40197 560 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 SUOXP51687 545 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 PRAMEP78395 509 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 THOC5Q13769 683 aaKnown RBP20.75■□□□□ 0.91
SMCO4-201ENST00000298966 UBAP2LQ14157 1087 aaKnown RBP20.75■□□□□ 0.91
SMCO4-201ENST00000298966 EFTUD2Q15029 972 aaKnown RBP eCLIP20.75■□□□□ 0.91
SMCO4-201ENST00000298966 TMED2Q15363 201 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 ZNF805Q5CZA5 627 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 GRTP1Q5TC63 336 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 TMEM159Q96B96 161 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 SGSM3Q96HU1 749 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 CNOT10Q9H9A5 744 aaKnown RBP20.75■□□□□ 0.91
SMCO4-201ENST00000298966 NLE1Q9NVX2 485 aaPredicted RBP20.75■□□□□ 0.91
SMCO4-201ENST00000298966 ADAM21Q9UKJ8 722 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 GPR34Q9UPC5 381 aa20.75■□□□□ 0.91
SMCO4-201ENST00000298966 PRAMEF33A0A0G2JMD5 474 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 PRAMEF10O60809 474 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 TM7SF2O76062 418 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 SNRPAP09012 282 aaKnown RBP20.74■□□□□ 0.91
SMCO4-201ENST00000298966 ITIH1P19827 911 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 HMGCLP35914 325 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 ARCN1P48444 511 aaKnown RBP20.74■□□□□ 0.91
SMCO4-201ENST00000298966 ZNF140P52738 457 aaPredicted RBP20.74■□□□□ 0.91
SMCO4-201ENST00000298966 CNGA3Q16281 694 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 TUBB8Q3ZCM7 444 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 TEDDM1Q5T9Z0 273 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 EXOC3L1Q86VI1 746 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 ZFAND4Q86XD8 727 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 GKN2Q86XP6 184 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 HID1Q8IV36 788 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 RAVER1Q8IY67 606 aaKnown RBP20.74■□□□□ 0.91
SMCO4-201ENST00000298966 CYP4X1Q8N118 509 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 OR6K2Q8NGY2 324 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 ALKBH8Q96BT7 664 aaKnown RBP20.74■□□□□ 0.91
SMCO4-201ENST00000298966 MCCC1Q96RQ3 725 aaPredicted RBP20.74■□□□□ 0.91
SMCO4-201ENST00000298966 TRIM56Q9BRZ2 755 aaKnown RBP20.74■□□□□ 0.91
SMCO4-201ENST00000298966 ZNF711Q9Y462 761 aa20.74■□□□□ 0.91
SMCO4-201ENST00000298966 H7C0S8 307 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 CYP2A6P11509 494 aaPredicted RBP20.73■□□□□ 0.91
SMCO4-201ENST00000298966 GP1BBP13224 206 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 KRT15P19012 456 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 GKP32189 559 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 SPRP35270 261 aaPredicted RBP20.73■□□□□ 0.91
SMCO4-201ENST00000298966 POLD2P49005 469 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 HK3P52790 923 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 GYS2P54840 703 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 CYP4F2P78329 520 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 GABPB1Q06547 395 aaPredicted RBP20.73■□□□□ 0.91
SMCO4-201ENST00000298966 ZDHHC20Q5W0Z9 365 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 CES3Q6UWW8 571 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 TRABD2AQ86V40 505 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 OR13J1Q8NGT2 312 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 SCRN2Q96FV2 425 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 ZNF778Q96MU6 729 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 ADNPQ9H2P0 1102 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 SSU72Q9NP77 194 aaKnown RBP20.73■□□□□ 0.91
SMCO4-201ENST00000298966 SMYD2Q9NRG4 433 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 TBK1Q9UHD2 729 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 PKP3Q9Y446 797 aa20.73■□□□□ 0.91
SMCO4-201ENST00000298966 SPTAN1Q13813 2472 aaKnown RBP20.73■□□□□ 0.91
SMCO4-201ENST00000298966 BSNQ9UPA5 3926 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 CXorf49A8MYA2 514 aaPredicted RBP20.72■□□□□ 0.91
SMCO4-201ENST00000298966 AGRPO00253 132 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 STX7O15400 261 aaKnown RBP20.72■□□□□ 0.91
SMCO4-201ENST00000298966 MMP20O60882 483 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 RASGRP1O95267 797 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 VAPBO95292 243 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 UGT2B4P06133 528 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 ERVK-10P10266 1014 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 ZNF30P17039 623 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 CD82P27701 267 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 HPDP32754 393 aaPredicted RBP20.72■□□□□ 0.91
SMCO4-201ENST00000298966 MAPK10P53779 464 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 TCEA2Q15560 299 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 HSP90AA5PQ58FG0 334 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 MRNIPQ6NTE8 343 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 NEPROQ6NW34 567 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 AFTPHQ6ULP2 937 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 PACS1Q6VY07 963 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 RD3Q7Z3Z2 195 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 TTC30BQ8N4P2 665 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 GPR150Q8NGU9 434 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 CXorf40AQ8TE69 158 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 USP7Q93009 1102 aa20.72■□□□□ 0.91
SMCO4-201ENST00000298966 VOPP1Q96AW1 172 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms