RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ADAMTS6Q9UKP5 1117 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 REV3LO60673 3130 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 ANTXRLA6NF34 631 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 E2F3O00716 465 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 GSC2O15499 205 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 LDLRAP1Q5SW96 308 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 MTSS1LQ765P7 747 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 CYP2U1Q7Z449 544 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 PARP9Q8IXQ6 854 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 MCUR1Q96AQ8 359 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 C19orf60Q96EN9 201 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 ZBTB26Q9HCK0 441 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 TNPO3Q9Y5L0 923 aaKnown RBP14.02□□□□□ -0.17
C9orf3-202ENST00000297979 C5orf42Q9H799 3197 aa14.02□□□□□ -0.17
C9orf3-202ENST00000297979 PLK4O00444 970 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 FOSL1P15407 271 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 ADSLP30566 484 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-202ENST00000297979 PSMD8P48556 350 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 MXRA7P84157 204 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 PCBP2Q15366 365 aaKnown RBP eCLIP14.01□□□□□ -0.171e-6■■■□□ 17.9
C9orf3-202ENST00000297979 RBBP7Q16576 425 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 KHDC1Q4VXA5 237 aaKnown RBP14.01□□□□□ -0.17
C9orf3-202ENST00000297979 ERN2Q76MJ5 926 aaKnown RBP14.01□□□□□ -0.17
C9orf3-202ENST00000297979 PELI3Q8N2H9 469 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 OR56A4Q8NGH8 313 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 FBXO27Q8NI29 283 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 GLYATL1Q969I3 302 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 ESAMQ96AP7 390 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 HGH1Q9BTY7 390 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 C1orf21Q9H246 121 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 ASB1Q9Y576 335 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 DNAJC15Q9Y5T4 150 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 A8MUI8 341 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 KPNA5O15131 536 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 VCLP18206 1134 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 PIK3R1P27986 724 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 FOXA1P55317 472 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 GBX1Q14549 363 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 PHKG1Q16816 387 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 DNAL1Q4LDG9 190 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 TWIST2Q8WVJ9 160 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 VMP1Q96GC9 406 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 ANKRD12Q6UB98 2062 aa14.01□□□□□ -0.17
C9orf3-202ENST00000297979 QSOX1O00391 747 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 CRCPO75575 148 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 FTH1P02794 183 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 COX4I1P13073 169 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 RIPK1Q13546 671 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 COL13A1Q5TAT6 717 aaPredicted RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 FAM219BQ5XKK7 198 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 ARHGAP24Q8N264 748 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 FAM13CQ8NE31 585 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 MARK4Q96L34 752 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 KCNA7Q96RP8 456 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 RDH14Q9HBH5 336 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 MRGBPQ9NV56 204 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 COQ6Q9Y2Z9 468 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 STON1Q9Y6Q2 735 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 LRRK1Q38SD2 2015 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 A0A1B0GTL3 188 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 MEI4A8MW99 385 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 GIPC1O14908 333 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 SGTAO43765 313 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 NUAK1O60285 661 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 ESRRBO95718 433 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 GUCA1CO95843 209 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 C6P13671 934 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 LTBRP36941 435 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 SOX9P48436 509 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 HSPA14Q0VDF9 509 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 BOP1Q14137 746 aaKnown RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 TMEM52BQ4KMG9 183 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 PLEKHS1Q5SXH7 462 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 FAM46CQ5VWP2 391 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 CHSY3Q70JA7 882 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 ZNF765Q7L2R6 523 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 SYVN1Q86TM6 617 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 DLG3Q92796 817 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 NACC2Q96BF6 587 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 ERLEC1Q96DZ1 483 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 NUS1Q96E22 293 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 MSLNLQ96KJ4 702 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 LENG8Q96PV6 779 aaPredicted RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 EGFL8Q99944 293 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 HDAC8Q9BY41 377 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 MMADHCQ9H3L0 296 aaPredicted RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 PTBP2Q9UKA9 531 aaKnown RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 COPG1Q9Y678 874 aaKnown RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 RECQL5O94762 991 aaPredicted RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 ATP6V1G2O95670 118 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 EZRP15311 586 aaKnown RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 ENPP2Q13822 863 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 ZNF648Q5T619 568 aaPredicted RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 SULT1C3Q6IMI6 304 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 PHYKPLQ8IUZ5 450 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 CHPFQ8IZ52 775 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 RAB7BQ96AH8 199 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 ZNF382Q96SR6 550 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 NUSAP1Q9BXS6 441 aaKnown RBP14□□□□□ -0.17
C9orf3-202ENST00000297979 FBRSL1Q9HCM7 1045 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms