RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 CCDC106Q9BWC9 280 aa22.43■■□□□ 1.18
PTX3-201ENST00000295927 ZCCHC2Q9C0B9 1178 aaKnown RBP22.43■■□□□ 1.18
PTX3-201ENST00000295927 OR2AG1Q9H205 316 aa22.43■■□□□ 1.18
PTX3-201ENST00000295927 EPHX3Q9H6B9 360 aa22.43■■□□□ 1.18
PTX3-201ENST00000295927 RDH14Q9HBH5 336 aa22.43■■□□□ 1.18
PTX3-201ENST00000295927 TRIM39Q9HCM9 518 aa22.43■■□□□ 1.18
PTX3-201ENST00000295927 FAM8A1Q9UBU6 413 aa22.43■■□□□ 1.18
PTX3-201ENST00000295927 TRPC5OSA6NMA1 111 aa22.42■■□□□ 1.18
PTX3-201ENST00000295927 CAPN14A8MX76 684 aa22.42■■□□□ 1.18
PTX3-201ENST00000295927 E2F3O00716 465 aa22.42■■□□□ 1.18
PTX3-201ENST00000295927 SKAP2O75563 359 aaPredicted RBP22.42■■□□□ 1.18
PTX3-201ENST00000295927 BTKQ06187 659 aa22.42■■□□□ 1.18
PTX3-201ENST00000295927 UBAP2LQ14157 1087 aaKnown RBP22.42■■□□□ 1.18
PTX3-201ENST00000295927 FAM219BQ5XKK7 198 aa22.42■■□□□ 1.18
PTX3-201ENST00000295927 CLEC6AQ6EIG7 209 aa22.42■■□□□ 1.18
PTX3-201ENST00000295927 AGAP11Q8TF27 550 aa22.42■■□□□ 1.18
PTX3-201ENST00000295927 SKA2Q8WVK7 121 aaPredicted RBP22.42■■□□□ 1.18
PTX3-201ENST00000295927 FAM131CQ96AQ9 280 aa22.42■■□□□ 1.18
PTX3-201ENST00000295927 CDX2Q99626 313 aaPredicted RBP22.42■■□□□ 1.18
PTX3-201ENST00000295927 PTBP2Q9UKA9 531 aaKnown RBP22.42■■□□□ 1.18
PTX3-201ENST00000295927 E9PBE3 544 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 KLHL41O60662 606 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 DNAJC8O75937 253 aaPredicted RBP22.41■■□□□ 1.18
PTX3-201ENST00000295927 SLCO2B1O94956 709 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 FGF4P08620 206 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 PCBP2Q15366 365 aaKnown RBP eCLIP22.41■■□□□ 1.18
PTX3-201ENST00000295927 WSCD2Q2TBF2 565 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 LSM12Q3MHD2 195 aaKnown RBP22.41■■□□□ 1.18
PTX3-201ENST00000295927 PNCKQ6P2M8 343 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 ADAMTSL4Q6UY14 1074 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 ACAD11Q709F0 780 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 TREML1Q86YW5 311 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 CLYBLQ8N0X4 340 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 ASB11Q8WXH4 323 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 HLA-CQ95604 372 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 HIC2Q96JB3 615 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 LENG8Q96PV6 779 aaPredicted RBP22.41■■□□□ 1.18
PTX3-201ENST00000295927 EGFL8Q99944 293 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 HGH1Q9BTY7 390 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 ATXN10Q9UBB4 475 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 TRIM33Q9UPN9 1127 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 ZFR2Q9UPR6 939 aaKnown RBP22.41■■□□□ 1.18
PTX3-201ENST00000295927 SORCS3Q9UPU3 1222 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 TNPO3Q9Y5L0 923 aaKnown RBP22.41■■□□□ 1.18
PTX3-201ENST00000295927 PRUNE2Q8WUY3 3088 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 A0A1B0GTL3 188 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 TAPBPO15533 448 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 PCCBP05166 539 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 C8GP07360 202 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 NCF2P19878 526 aaPredicted RBP22.41■■□□□ 1.18
PTX3-201ENST00000295927 AGERQ15109 404 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 BCL7AQ4VC05 210 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 METTL21CQ5VZV1 264 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 NEK10Q6ZWH5 1172 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 UBE2R2Q712K3 238 aaPredicted RBP22.41■■□□□ 1.18
PTX3-201ENST00000295927 RPLP0P6Q8NHW5 317 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 FAM3CQ92520 227 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 NSL1Q96IY1 281 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 MAELQ96JY0 434 aaKnown RBP22.41■■□□□ 1.18
PTX3-201ENST00000295927 TUBB6Q9BUF5 446 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 PDE10AQ9Y233 779 aa22.41■■□□□ 1.18
PTX3-201ENST00000295927 SDHDO14521 159 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 PLRG1O43660 514 aaKnown RBP22.4■■□□□ 1.18
PTX3-201ENST00000295927 MLYCDO95822 493 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 CD72P21854 359 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 UGT3A2Q3SY77 523 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 SYTL3Q4VX76 610 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 SLC44A4Q53GD3 710 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 SULT1C3Q6IMI6 304 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 Q7L0L9 218 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 OR14C36Q8NHC7 312 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 RHBDF1Q96CC6 855 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 PTCD3Q96EY7 689 aaKnown RBP22.4■■□□□ 1.18
PTX3-201ENST00000295927 COX14Q96I36 57 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 CCDC28BQ9BUN5 200 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 SLC12A9Q9BXP2 914 aa22.4■■□□□ 1.18
PTX3-201ENST00000295927 PRR5-ARHGAP8B1AHC4 643 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 AZIN1O14977 448 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 LILRB5O75023 590 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 PBLDP30039 288 aaPredicted RBP22.39■■□□□ 1.18
PTX3-201ENST00000295927 RPIAP49247 311 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 ARHGAP8P85298 464 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 GTF2H3Q13889 308 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 CCINQ13939 588 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 LILRA3Q8N6C8 439 aaPredicted RBP22.39■■□□□ 1.18
PTX3-201ENST00000295927 OR56A4Q8NGH8 313 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 MSANTD3Q96H12 275 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 MEAF6Q9HAF1 191 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 PARVBQ9HBI1 364 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 CAPN7Q9Y6W3 813 aa22.39■■□□□ 1.18
PTX3-201ENST00000295927 NUMA1Q14980 2115 aa22.39■■□□□ 1.17
PTX3-201ENST00000295927 SLC5A10A0PJK1 596 aa22.39■■□□□ 1.17
PTX3-201ENST00000295927 PRR23AA6NEV1 266 aa22.39■■□□□ 1.17
PTX3-201ENST00000295927 GFYI3L273 518 aa22.39■■□□□ 1.17
PTX3-201ENST00000295927 MYO1CO00159 1063 aa22.39■■□□□ 1.17
PTX3-201ENST00000295927 VEGFDO43915 354 aa22.39■■□□□ 1.17
PTX3-201ENST00000295927 ENO2P09104 434 aaPredicted RBP22.39■■□□□ 1.17
PTX3-201ENST00000295927 SRFP11831 508 aa22.39■■□□□ 1.17
PTX3-201ENST00000295927 HSPA7P48741 367 aa22.39■■□□□ 1.17
PTX3-201ENST00000295927 FOXA1P55317 472 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms