RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 SNAP47Q5SQN1 464 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 AGAP9Q5VTM2 703 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 DESI1Q6ICB0 168 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 FAM45BPQ6NSW5 357 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 RANBP10Q6VN20 620 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 CFAP52Q8N1V2 620 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 FAM45AQ8TCE6 357 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 MCOLN3Q8TDD5 553 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 FRS2Q8WU20 508 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 OSCP1Q8WVF1 389 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 ZHX1-C8orf76Q96EF9 292 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 GPR78Q96P69 363 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 TSGA13Q96PP4 275 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 CGREF1Q99674 301 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 TDRD1Q9BXT4 1180 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 GPR62Q9BZJ7 368 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 CATSPERBQ9H7T0 1116 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 ADPRHL2Q9NX46 363 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 ERVK-18Q9QC07 812 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 FBXO5Q9UKT4 447 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 CARD8Q9Y2G2 431 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 COL4A4P53420 1690 aaPredicted RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 MAGEB16A2A368 324 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 CYP7B1O75881 506 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 PGLSO95336 258 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 CST1P01037 141 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 ZNF37AP17032 561 aaPredicted RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 HOXC13P31276 330 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 FCGRTP55899 365 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 KCNAB2Q13303 367 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 PAGE3Q5JUK9 113 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 TMEM173Q86WV6 379 aaPredicted RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 S100ZQ8WXG8 99 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 SMIM14Q96QK8 99 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 COQ7Q99807 217 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 HOPXQ9BPY8 73 aaPredicted RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 TUBA1CQ9BQE3 449 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 RHNO1Q9BSD3 238 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 GPN2Q9H9Y4 310 aaPredicted RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 MAGEE1Q9HCI5 957 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 AMBNQ9NP70 447 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 ABT1Q9ULW3 272 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 PATJQ8NI35 1801 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 TARM1B6A8C7 271 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 SCAMP3O14828 347 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 MYCP01106 439 aaPredicted RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 PRSS56P0CW18 603 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 ACVRL1P37023 503 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 KCNC1P48547 511 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 ILF2Q12905 390 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 ACAP2Q15057 778 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 SKIV2LQ15477 1246 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 UGP2Q16851 508 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 FAM209AQ5JX71 171 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 BRMS1LQ5PSV4 323 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 VARS2Q5ST30 1063 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 TXNDC11Q6PKC3 985 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 TRAF7Q6Q0C0 670 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 GLB1LQ6UWU2 654 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 RFPL4BQ6ZWI9 263 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 SLC22A15Q8IZD6 547 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 PGBD5Q8N414 524 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 PPHLN1Q8NEY8 458 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 PTCD2Q8WV60 388 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 ANKRD49Q8WVL7 239 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 TEX37Q96LM6 180 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 TTYH2Q9BSA4 534 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 THUMPD3Q9BV44 507 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 RIBC2Q9H4K1 309 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 TREX1Q9NSU2 369 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 INTS10Q9NVR2 710 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 HACD3Q9P035 362 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 DNMT3BQ9UBC3 853 aaKnown RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 PCDHGA11Q9Y5H2 935 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 PRRC2BQ5JSZ5 2229 aaKnown RBP11.87□□□□□ -0.51
CLPB-201ENST00000294053 GREB1Q4ZG55 1949 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 CCDC154A6NI56 674 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 ZSCAN5BA6NJL1 495 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 ZNF99A8MXY4 864 aaPredicted RBP11.87□□□□□ -0.51
CLPB-201ENST00000294053 TSPAN3O60637 253 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 ANXA9O76027 345 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 CHRNB1P11230 501 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 GPX3P22352 226 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 ALDH7A1P49419 539 aaKnown RBP11.87□□□□□ -0.51
CLPB-201ENST00000294053 DAG1Q14118 895 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 LRIT3Q3SXY7 679 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 CCDC58Q4VC31 144 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 GTF2IRD2BQ6EKJ0 949 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 GTF2IRD2Q86UP8 949 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 P2RY8Q86VZ1 359 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 CELF2-AS1Q8N7Q2 184 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 PTGR2Q8N8N7 351 aaPredicted RBP11.87□□□□□ -0.51
CLPB-201ENST00000294053 SUN5Q8TC36 379 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 ZUFSPQ96AP4 578 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 EFHD2Q96C19 240 aaPredicted RBP11.87□□□□□ -0.51
CLPB-201ENST00000294053 SH3GL1Q99961 368 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 RMND5AQ9H871 391 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 MARCH4Q9P2E8 410 aaPredicted RBP11.87□□□□□ -0.51
CLPB-201ENST00000294053 UTS2RQ9UKP6 389 aa11.87□□□□□ -0.51
CLPB-201ENST00000294053 SNX8Q9Y5X2 465 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms