RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 TNFRSF10CO14798 259 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 BCAT2O15382 392 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-201ENST00000293889 MAGEC1O60732 1142 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 AOAHP28039 575 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 PBLDP30039 288 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-201ENST00000293889 IRF9Q00978 393 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 FZD2Q14332 565 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 PLA2G4EQ3MJ16 856 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 PYCR3Q53H96 274 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 OTOAQ7RTW8 1153 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 DCP2Q8IU60 420 aaKnown RBP17.47■□□□□ 0.39
CCDC78-201ENST00000293889 ZBTB2Q8N680 514 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 ELMO1Q92556 727 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 INPP5DQ92835 1189 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 TSACCQ96A04 125 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-201ENST00000293889 PDXPQ96GD0 296 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 PLCD4Q9BRC7 762 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 KLC4Q9NSK0 619 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 SENP1Q9P0U3 644 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-201ENST00000293889 GULP1Q9UBP9 304 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 KLQ9UEF7 1012 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 SLC23A2Q9UGH3 650 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 ACOT9Q9Y305 439 aa17.47■□□□□ 0.39
CCDC78-201ENST00000293889 ZFHX2Q9C0A1 2572 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-201ENST00000293889 TLR4O00206 839 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 KMOO15229 486 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 SNX3O60493 162 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 EPN2O95208 641 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 CCNFP41002 786 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 GNPDA1P46926 289 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 CSNK1EP49674 416 aaKnown RBP17.46■□□□□ 0.39
CCDC78-201ENST00000293889 SRP54P61011 504 aaKnown RBP17.46■□□□□ 0.39
CCDC78-201ENST00000293889 SLC18A2Q05940 514 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 OVGP1Q12889 678 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 SPRED3Q2MJR0 410 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 ALG11Q2TAA5 492 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 ZNF658BQ4V348 819 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-201ENST00000293889 TAF1BQ53T94 588 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-201ENST00000293889 ASCL5Q7RTU5 278 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 GALNT13Q8IUC8 556 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 ANKRD49Q8WVL7 239 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 LOXL4Q96JB6 756 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 SMC6Q96SB8 1091 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 SLC13A1Q9BZW2 595 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 CARS2Q9HA77 564 aaKnown RBP17.46■□□□□ 0.39
CCDC78-201ENST00000293889 TMEM74BQ9NUR3 256 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 KLHL42Q9P2K6 505 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 FAM8A1Q9UBU6 413 aa17.46■□□□□ 0.39
CCDC78-201ENST00000293889 A0A087X1B8 175 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 MGAT4DA6NG13 374 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 SCAMP1O15126 338 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 TOP3BO95985 862 aaKnown RBP17.45■□□□□ 0.38
CCDC78-201ENST00000293889 ZNF37AP17032 561 aaPredicted RBP17.45■□□□□ 0.38
CCDC78-201ENST00000293889 AFF3P51826 1226 aaKnown RBP17.45■□□□□ 0.38
CCDC78-201ENST00000293889 ARHGAP8P85298 464 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 EIF2B5Q13144 721 aaKnown RBP17.45■□□□□ 0.38
CCDC78-201ENST00000293889 BOP1Q14137 746 aaKnown RBP17.45■□□□□ 0.38
CCDC78-201ENST00000293889 CHST15Q7LFX5 561 aaPredicted RBP17.45■□□□□ 0.38
CCDC78-201ENST00000293889 RD3Q7Z3Z2 195 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 CPNE9Q8IYJ1 553 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 PLD6Q8N2A8 252 aaKnown RBP17.45■□□□□ 0.38
CCDC78-201ENST00000293889 SPATA6LQ8N4H0 392 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 OR2L2Q8NH16 312 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 CAAP1Q9H8G2 361 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 PILRBQ9UKJ0 227 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 PLEKHM1Q9Y4G2 1056 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 GPSM3Q9Y4H4 160 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 DNMT3AQ9Y6K1 912 aaPredicted RBP17.45■□□□□ 0.38
CCDC78-201ENST00000293889 TP53BP1Q12888 1972 aaPredicted RBP17.45■□□□□ 0.38
CCDC78-201ENST00000293889 LAMA1P25391 3075 aa17.45■□□□□ 0.38
CCDC78-201ENST00000293889 TMEM120BA0PK00 339 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 KPNA5O15131 536 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 VILLO15195 856 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 SPAG7O75391 227 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 GSTM1P09488 218 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 CCDC166P0CW27 439 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 GSTM4Q03013 218 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 HSPA14Q0VDF9 509 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 DLG1Q12959 904 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 ACSBG2Q5FVE4 666 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 PLEKHS1Q5SXH7 462 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 XKR5Q6UX68 686 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 CCDC91Q7Z6B0 441 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 CLEC14AQ86T13 490 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 AMZ2Q86W34 360 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 HID1Q8IV36 788 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 CFAP206Q8IYR0 622 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 CENPLQ8N0S6 344 aaPredicted RBP17.44■□□□□ 0.38
CCDC78-201ENST00000293889 OXR1Q8N573 874 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 LILRA3Q8N6C8 439 aaPredicted RBP17.44■□□□□ 0.38
CCDC78-201ENST00000293889 BANPQ8N9N5 519 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 EEF1AKMT1Q8WVE0 214 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 KCTD4Q8WVF5 259 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 UBXN10Q96LJ8 280 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 ARRDC1-AS1Q9H2J1 176 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 SYTL2Q9HCH5 934 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 CDYLQ9Y232 598 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 ANKRD6Q9Y2G4 727 aa17.44■□□□□ 0.38
CCDC78-201ENST00000293889 ADAMTS9Q9P2N4 1935 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms