RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 A0A1W2PQ67 120 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 SCAMP3O14828 347 aaKnown RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 GJB5O95377 273 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 CSKP41240 450 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 NSG1P42857 185 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 FOXA1P55317 472 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 HSPA14Q0VDF9 509 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 DDX39BQ13838 428 aaKnown RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ARHGAP15Q53QZ3 475 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 EP400NLQ6ZTU2 488 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 UBE2R2Q712K3 238 aaPredicted RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ZFAND4Q86XD8 727 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 LIX1Q8N485 282 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 KLHDC9Q8NEP7 349 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 MTFMTQ96DP5 389 aaKnown RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 DUS3LQ96G46 650 aaKnown RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 APOL4Q9BPW4 351 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 PAIP1Q9H074 479 aaKnown RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 PCDHB3Q9Y5E6 796 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ZNF840PA6NDX5 716 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 A8MX80 341 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 QSOX1O00391 747 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 UBFD1O14562 309 aaKnown RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 OR1I1O60431 355 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 CPSF4O95639 269 aaKnown RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ADCK1Q86TW2 530 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 HIPK1Q86Z02 1210 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ALDH16A1Q8IZ83 802 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 MFSD2AQ8NA29 543 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 OR8J3Q8NGG0 315 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ZFP28Q8NHY6 868 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ATL1Q8WXF7 558 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ARHGAP39Q9C0H5 1083 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 GPR45Q9Y5Y3 372 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 INPPL1O15357 1258 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 STC2O76061 302 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 LATS1O95835 1130 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 MT-ND1P03886 318 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 CCNA2P20248 432 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 MYF6P23409 242 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 RFC2P35250 354 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 PGFP49763 221 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 RPS6KA3P51812 740 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 IRF8Q02556 426 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 RCAN2Q14206 197 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 PLCL1Q15111 1095 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 FAM174BQ3ZCQ3 159 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 RTP2Q5QGT7 225 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 NCEH1Q6PIU2 408 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ATG14Q6ZNE5 492 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 TPGS1Q6ZTW0 290 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 P3H2Q8IVL5 708 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 OFCC1Q8IZS5 231 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 SVOPQ8N4V2 548 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 TMEM125Q96AQ2 219 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 NSMCE3Q96MG7 304 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 TMEM74Q96NL1 305 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 CYP2S1Q96SQ9 504 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 HBEGFQ99075 208 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 SRRDQ9UH36 339 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ZNHIT2Q9UHR6 403 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 SAMD4AQ9UPU9 718 aaKnown RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 CXCR6O00574 342 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 SOCS2O14508 198 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 PEX11BO96011 259 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 PRSS56P0CW18 603 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 CBSLP0DN79 551 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 G6PDP11413 515 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ZNF26P17031 533 aaPredicted RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 HOXD9P28356 352 aaPredicted RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 CBSP35520 551 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 SEMA3AQ14563 771 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 HIST2H2ACQ16777 129 aaPredicted RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 HIST2H2AA3Q6FI13 130 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 NADSYN1Q6IA69 706 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 TMEM207Q6UWW9 146 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 RNF111Q6ZNA4 994 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 SAPCD2Q86UD0 394 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 PHC3Q8NDX5 983 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 SLC29A1Q99808 456 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 ZDHHC6Q9H6R6 413 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 RHBDL2Q9NX52 303 aa9.89□□□□□ -0.83
HMGCR-201ENST00000287936 IFT80Q9P2H3 777 aaPredicted RBP9.89□□□□□ -0.83
HMGCR-201ENST00000287936 MYOCOSA0A1B0GUC4 107 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 A0A1W2PQ45 241 aaPredicted RBP9.88□□□□□ -0.83
HMGCR-201ENST00000287936 A0A1W2PQY0 241 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 MGAT4DA6NG13 374 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 H0YAE9 185 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 ERN1O75460 977 aaKnown RBP9.88□□□□□ -0.83
HMGCR-201ENST00000287936 TFAP2AP05549 437 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 C8GP07360 202 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 RPIAP49247 311 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 C21orf59P57076 290 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 ST8SIA6P61647 398 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 ACSM2AQ08AH3 577 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 PCBP2Q15366 365 aaKnown RBP eCLIP9.88□□□□□ -0.831e-10■■■■□ 24
HMGCR-201ENST00000287936 FOXB2Q5VYV0 432 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 ACSM2BQ68CK6 577 aa9.88□□□□□ -0.83
HMGCR-201ENST00000287936 TMEM214Q6NUQ4 689 aaKnown RBP9.88□□□□□ -0.83
HMGCR-201ENST00000287936 GALNT13Q8IUC8 556 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms