RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 DNMT3BQ9UBC3 853 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 ZNF711Q9Y462 761 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 DNAJC15Q9Y5T4 150 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 HCFC2Q9Y5Z7 792 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 TPST1O60507 370 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 VARSP26640 1264 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 OXTRP30559 389 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 STK19P49842 368 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 STC1P52823 247 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 C21orf59P57076 290 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 TEAD2Q15562 447 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 TAF1AQ15573 450 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 AARS2Q5JTZ9 985 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 ISCA2Q86U28 154 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 ELMOD1Q8N336 334 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 DNAJC5GQ8N7S2 189 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 MRPL43Q8N983 215 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 DCAF4L2Q8NA75 395 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 DDHD1Q8NEL9 900 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 MYLIPQ8WY64 445 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 TRIM54Q9BYV2 358 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 PKD2L2Q9NZM6 624 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 PRKAG2Q9UGJ0 569 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 MAFFQ9ULX9 164 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 FAM50BQ9Y247 325 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 ARIH1Q9Y4X5 557 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 XIRP2A4UGR9 3374 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 A0A1W2PPW3 197 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 EI24O14681 340 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 BNIP3LO60238 219 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 OR1I1O60431 355 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 NOL3O60936 208 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 FMO4P31512 558 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 CLCN4P51793 760 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 SEMG2Q02383 582 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 PPIGQ13427 754 aaKnown RBP eCLIP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 MOGQ16653 247 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 INO80DQ53TQ3 878 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 ZNF783Q6ZMS7 281 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 KCTD8Q6ZWB6 473 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 DDIASQ8IXT1 998 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 EXT2Q93063 718 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 PLEKHA8Q96JA3 519 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 INTS10Q9NVR2 710 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 PCDHA9Q9Y5H5 950 aa18.05■□□□□ 0.48
PDLIM3-201ENST00000284767 C2orf81A6NN90 581 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 A8MX80 341 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 UMPSP11172 480 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 TSPAN8P19075 237 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 BMPR1AP36894 532 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 RPS9P46781 194 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 HLCSP50747 726 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 CYBRD1Q53TN4 286 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 USP51Q70EK9 711 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 PTRH1Q86Y79 214 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 PHYKPLQ8IUZ5 450 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 GPR65Q8IYL9 337 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 PAPD5Q8NDF8 572 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 GPR150Q8NGU9 434 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 TSPEARQ8WU66 669 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 PTERQ96BW5 349 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 RAD9AQ99638 391 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 SDR39U1Q9NRG7 319 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 GALPQ9UBC7 116 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 PER2O15055 1255 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 EPCAMP16422 314 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 FDXRP22570 491 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 SH3BP2P78314 561 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 ILF2Q12905 390 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 CYP51A1Q16850 503 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 FGD3Q5JSP0 725 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 TMEM26Q6ZUK4 368 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 TBC1D21Q8IYX1 336 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 SPPL3Q8TCT6 385 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 TWIST2Q8WVJ9 160 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 PEX13Q92968 403 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 EMILIN2Q9BXX0 1053 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 ADGRE3Q9BY15 652 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 ABCB8Q9NUT2 735 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 PAIP2BQ9ULR5 123 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 MED16Q9Y2X0 877 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 SZT2Q5T011 3432 aa18.04■□□□□ 0.48
PDLIM3-201ENST00000284767 TMX2-CTNND1H3BSU7 103 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 BOLA2-SMG1P6H3BVE0 249 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 AZIN1O14977 448 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 COQ9O75208 318 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 MOSPD3O75425 235 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 CPNE6O95741 557 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 LPOP22079 712 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 MC4RP32245 332 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 PHEXP78562 749 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 CAMK1Q14012 370 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 CAPRIN1Q14444 709 aaKnown RBP18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 PDCD4Q53EL6 469 aaKnown RBP18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 CCNYL2Q5T2Q4 361 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 KANK2Q63ZY3 851 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 TMEM25Q86YD3 366 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 C7orf61Q8IZ16 206 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 CCDC97Q96F63 343 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 C2orf49Q9BVC5 232 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms