RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 UBDO15205 165 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 PDE5AO76074 875 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 WASP42768 502 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 SLC44A4Q53GD3 710 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 ADHFE1Q8IWW8 467 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 PIP4K2CQ8TBX8 421 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 KCNV2Q8TDN2 545 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 AKTIPQ9H8T0 292 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 SHISA7A6NL88 538 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 C16orf96A6NNT2 1141 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 CIB2O75838 187 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 NUDT2P50583 147 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 C2orf27AQ580R0 203 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 DSG4Q86SJ6 1040 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 ADAMTSL2Q86TH1 951 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 COPS8Q99627 209 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 DUSP12Q9UNI6 340 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 E2F3O00716 465 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 PSMG1O95456 288 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 ALDOCP09972 364 aaKnown RBP20.6■□□□□ 0.89
YBX3-202ENST00000279550 CYP2A6P11509 494 aaPredicted RBP20.6■□□□□ 0.89
YBX3-202ENST00000279550 DGKAP23743 735 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 NTSR1P30989 418 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 NSG1P42857 185 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 RGS4P49798 205 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 RALGDSQ12967 914 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 CAMK2GQ13555 558 aaPredicted RBP20.6■□□□□ 0.89
YBX3-202ENST00000279550 ARHGEF7Q14155 803 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 PTK2BQ14289 1009 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 SQLEQ14534 574 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 RBBP7Q16576 425 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 FRA10AC1Q70Z53 315 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 MYO1HQ8N1T3 1032 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 IL17RCQ8NAC3 791 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 FAM3CQ92520 227 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 DLG3Q92796 817 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 SCAMP4Q969E2 229 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 HGH1Q9BTY7 390 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 SPATS2LQ9NUQ6 558 aaKnown RBP20.6■□□□□ 0.89
YBX3-202ENST00000279550 PKD2L2Q9NZM6 624 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 TIMM22Q9Y584 194 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 F5P12259 2224 aa20.6■□□□□ 0.89
YBX3-202ENST00000279550 CCNT2O60583 730 aaKnown RBP20.59■□□□□ 0.89
YBX3-202ENST00000279550 EZRP15311 586 aaKnown RBP20.59■□□□□ 0.89
YBX3-202ENST00000279550 GNAZP19086 355 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 ITGB7P26010 798 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 ERFP50548 548 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 METAP1P53582 386 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 ZP2Q05996 745 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 TBL3Q12788 808 aaKnown RBP20.59■□□□□ 0.89
YBX3-202ENST00000279550 GRB7Q14451 532 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 PHKG1Q16816 387 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 TRMT5Q32P41 509 aaKnown RBP20.59■□□□□ 0.89
YBX3-202ENST00000279550 PARS2Q7L3T8 475 aaKnown RBP20.59■□□□□ 0.89
YBX3-202ENST00000279550 PHYKPLQ8IUZ5 450 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 MMAAQ8IVH4 418 aaKnown RBP20.59■□□□□ 0.89
YBX3-202ENST00000279550 ULK4Q96C45 1275 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 ERLEC1Q96DZ1 483 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 SPATA16Q9BXB7 569 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 LATS2Q9NRM7 1088 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 PLXNA2O75051 1894 aa20.59■□□□□ 0.89
YBX3-202ENST00000279550 SYNCRIPO60506 623 aaKnown RBP20.58■□□□□ 0.89
YBX3-202ENST00000279550 GPC4O75487 556 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 LINC00032P0C843 101 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 ZNF30P17039 623 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 NFKBIAP25963 317 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 ETV3P41162 512 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 RCN1Q15293 331 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 ZDHHC20Q5W0Z9 365 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 Q6ZVL8 140 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 DET1Q7L5Y6 550 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 DDIASQ8IXT1 998 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 DSELQ8IZU8 1212 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 OR56A4Q8NGH8 313 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 PPP1R16AQ96I34 528 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 GABRG3Q99928 467 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 DCLRE1BQ9H816 532 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 OARD1Q9Y530 152 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 ANKRD12Q6UB98 2062 aa20.58■□□□□ 0.89
YBX3-202ENST00000279550 C1QTNF3-AMACRE9PGA6 284 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 PSMD12O00232 456 aaPredicted RBP20.58■□□□□ 0.88
YBX3-202ENST00000279550 TAPBPO15533 448 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 FFAR2O15552 330 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 ANP32DO95626 131 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 ESRRBO95718 433 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 LMNAP02545 664 aaKnown RBP20.58■□□□□ 0.88
YBX3-202ENST00000279550 CD72P21854 359 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 XPAP23025 273 aaPredicted RBP20.58■□□□□ 0.88
YBX3-202ENST00000279550 CCR7P32248 378 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 ACTR3P61158 418 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 FASTKQ14296 549 aaKnown RBP20.58■□□□□ 0.88
YBX3-202ENST00000279550 PCBP2Q15366 365 aaKnown RBP eCLIP20.58■□□□□ 0.88
YBX3-202ENST00000279550 AGKQ53H12 422 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 C1orf146Q5VVC0 180 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 SDE2Q6IQ49 451 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 DPPA4Q7L190 304 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 KYQ8NBH2 561 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 PDPRQ8NCN5 879 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 NPAS2Q99743 824 aa20.58■□□□□ 0.88
YBX3-202ENST00000279550 FAM126AQ9BYI3 521 aaPredicted RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms