RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 MAD2L1Q13257 205 aaPredicted RBP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 TRIM16LQ309B1 348 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 ZNF549Q6P9A3 640 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 TSPAN33Q86UF1 283 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 PDSS2Q86YH6 399 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 APCDD1Q8J025 514 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 KREMEN2Q8NCW0 462 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 RORBQ92753 470 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 RTP3Q9BQQ7 232 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 C6orf62Q9GZU0 229 aaPredicted RBP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 CHCHD3Q9NX63 227 aaKnown RBP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 SHROOM3Q8TF72 1996 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 ZNF487B1APH4 448 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 SMAD6O43541 496 aaKnown RBP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 CYP7B1O75881 506 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 STC2O76061 302 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 OPN1SWP03999 348 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 RPS9P46781 194 aaKnown RBP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 ADARP55265 1226 aaKnown RBP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 CARTPTQ16568 116 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 OTUD1Q5VV17 481 aaPredicted RBP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 FAM180BQ6P0A1 224 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 CHST9Q7L1S5 443 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 SUSD6Q92537 303 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 REEP1Q9H902 201 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 SGK2Q9HBY8 427 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 G3V2T6 193 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 KERAO60938 352 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 CD1DP15813 335 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 OGFOD2Q6N063 350 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 RAVER1Q8IY67 606 aaKnown RBP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 ASB9Q96DX5 294 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 PLEKHG4BQ96PX9 1271 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 TCF25Q9BQ70 676 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 C1orf21Q9H246 121 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 TFB2MQ9H5Q4 396 aaKnown RBP14.37□□□□□ -0.11
CNOT9-201ENST00000273064 TBC1D30Q9Y2I9 924 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 ARFGEF1Q9Y6D6 1849 aa14.37□□□□□ -0.11
CNOT9-201ENST00000273064 ZNF840PA6NDX5 716 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 RFPL2O75678 378 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 KIR3DL1P43629 444 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 PREPP48147 710 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 LEPRP48357 1165 aaKnown RBP14.36□□□□□ -0.11
CNOT9-201ENST00000273064 COLGALT2Q8IYK4 626 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 LMNTD1Q8N9Z9 388 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 DPF3Q92784 378 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 LRCH3Q96II8 777 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 KCNE2Q9Y6J6 123 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 ILVBLA1L0T0 632 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 CLDN9O95484 217 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 TRBC1P01850 177 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 HLA-EP13747 358 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 OGNP20774 298 aaKnown RBP14.36□□□□□ -0.11
CNOT9-201ENST00000273064 PTPRZ1P23471 2315 aaPredicted RBP14.36□□□□□ -0.11
CNOT9-201ENST00000273064 SLC6A4P31645 630 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 BNIP2Q12982 314 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 SYVN1Q86TM6 617 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 ADHFE1Q8IWW8 467 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 STX19Q8N4C7 294 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 KRTCAP2Q8N6L1 136 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 PSKH2Q96QS6 385 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 RSL24D1Q9UHA3 163 aaKnown RBP14.36□□□□□ -0.11
CNOT9-201ENST00000273064 HAS3O00219 553 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 IFRD1O00458 451 aaPredicted RBP14.36□□□□□ -0.11
CNOT9-201ENST00000273064 AHCYL1O43865 530 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 PRKD3O94806 890 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 MAT2AP31153 395 aaKnown RBP14.36□□□□□ -0.11
CNOT9-201ENST00000273064 NUP107P57740 925 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 CYP27C1Q4G0S4 372 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 ARSIQ5FYB1 569 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 LRRC66Q68CR7 880 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 ZNF540Q8NDQ6 660 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 FEM1AQ9BSK4 669 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 MAP4K5Q9Y4K4 846 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 GMPPBQ9Y5P6 360 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 USP3Q9Y6I4 520 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 ATG2BQ96BY7 2078 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.36□□□□□ -0.11
CNOT9-201ENST00000273064 ELOVL7A1L3X0 281 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 PRDX6P30041 224 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 IFNA8P32881 189 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 HTR7P34969 479 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 MPPE1Q53F39 396 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 ELMSAN1Q6PJG2 1045 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 OR13J1Q8NGT2 312 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 SLC13A3Q8WWT9 602 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 SLC47A1Q96FL8 570 aa14.36□□□□□ -0.11
CNOT9-201ENST00000273064 DDX28Q9NUL7 540 aaKnown RBP14.36□□□□□ -0.11
CNOT9-201ENST00000273064 KDM1AO60341 852 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 CSF2RAP15509 400 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 MAGEA6P43360 314 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 MEF2AQ02078 507 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-201ENST00000273064 RHDQ02161 417 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 PIGFQ07326 219 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 PTCHD3Q3KNS1 767 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 C6orf136Q5SQH8 315 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 OR4F3Q6IEY1 312 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 TMEM220Q6QAJ8 160 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 CERS6Q6ZMG9 384 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms