RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 APOL5Q9BWW9 433 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 KLHL4Q9C0H6 718 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 HPS4Q9NQG7 708 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 PTBP2Q9UKA9 531 aaKnown RBP15.05■□□□□ 0
SF3B4-201ENST00000271628 PIP5K1BO14986 540 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 PDE5AO76074 875 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 AOAHP28039 575 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 ETV3P41162 512 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 ACADVLP49748 655 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 FOXA1P55317 472 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 STX1BP61266 288 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 ELP6Q0PNE2 266 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 RALGDSQ12967 914 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 FBXO48Q5FWF7 155 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 C9orf64Q5T6V5 341 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 RNF220Q5VTB9 566 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 ANKRD54Q6NXT1 300 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 VITQ6UXI7 678 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 LIPIQ6XZB0 460 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 TECPR1Q7Z6L1 1165 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 DDIASQ8IXT1 998 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 YAF2Q8IY57 180 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 NAT14Q8WUY8 206 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 SCAMP4Q969E2 229 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 PPP1R16AQ96I34 528 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 MARK4Q96L34 752 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 VPS35Q96QK1 796 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 SERPINI1Q99574 410 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 AKTIPQ9H8T0 292 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 EIF2B4Q9UI10 523 aaKnown RBP15.05■□□□□ -0
SF3B4-201ENST00000271628 TMPRSS11EQ9UL52 423 aa15.05■□□□□ -0
SF3B4-201ENST00000271628 ATP6AP2A0A1C7CYW4 349 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 TBC1D3BA6NDS4 549 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 PSMD12O00232 456 aaPredicted RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 AIM2O14862 343 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 CASQ2O14958 399 aaPredicted RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 PEX1O43933 1283 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 ATP6AP2O75787 350 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 MSH3P20585 1137 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 ITGB7P26010 798 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 CCR7P32248 378 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 EIF2DP41214 584 aaKnown RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 NUDT2P50583 147 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 ZNF234Q14588 700 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 ATAT1Q5SQI0 421 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 LDLRAP1Q5SW96 308 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 PLEKHS1Q5SXH7 462 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 GPRIN3Q6ZVF9 776 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 NUDT18Q6ZVK8 323 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 PARS2Q7L3T8 475 aaKnown RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 SYVN1Q86TM6 617 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 HPS6Q86YV9 775 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 DDHD1Q8NEL9 900 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 C3orf30Q96M34 536 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 KCNA7Q96RP8 456 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 EGFL8Q99944 293 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 ABCG8Q9H221 673 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 TMEM245Q9H330 911 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 EPOPA6NHQ4 379 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 GUCA1CO95843 209 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 ENO2P09104 434 aaPredicted RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 LBPP18428 481 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 MESP2Q0VG99 397 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 ART3Q13508 389 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 FASTKQ14296 549 aaKnown RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 FBXL19Q6PCT2 694 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 TTC23LQ6PF05 361 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 SYCE2Q6PIF2 218 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 SLC30A9Q6PML9 568 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 SERPINA13PQ6UXR4 307 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 RNF111Q6ZNA4 994 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 PIP4K2CQ8TBX8 421 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 BTN2A2Q8WVV5 523 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 ESAMQ96AP7 390 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 CCDC124Q96CT7 223 aaKnown RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 TUBGCP3Q96CW5 907 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 RIOK2Q9BVS4 552 aaKnown RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 MRPL1Q9BYD6 325 aaKnown RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 NSUN3Q9H649 340 aaKnown RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 TSR3Q9UJK0 312 aaKnown RBP15.04■□□□□ -0
SF3B4-201ENST00000271628 ADAMTS6Q9UKP5 1117 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 SARDHQ9UL12 918 aa15.04■□□□□ -0
SF3B4-201ENST00000271628 ENO4A6NNW6 628 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 WNT9AO14904 365 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 OTCP00480 354 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 FTH1P02794 183 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 C8GP07360 202 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 ANXA5P08758 320 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 UBTFL6P0CB48 400 aaPredicted RBP15.03■□□□□ -0
SF3B4-201ENST00000271628 MPC1LP0DKB6 136 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 UQCRBP14927 111 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 PSMC3P17980 439 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 CALRP27797 417 aaKnown RBP15.03■□□□□ -0
SF3B4-201ENST00000271628 MED21Q13503 144 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 GTF2H2Q13888 395 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 PTK2BQ14289 1009 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 GRIN2CQ14957 1233 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 ACOX1Q15067 660 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 POM121L1PQ3SYA9 428 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 NAIF1Q69YI7 327 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms