RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 OR2T11Q8NH01 316 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 KCNV2Q8TDN2 545 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 CCT7Q99832 543 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 MRPL1Q9BYD6 325 aaKnown RBP16.33■□□□□ 0.21
CCDC40-201ENST00000269318 CD244Q9BZW8 370 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 SDR39U1Q9NRG7 319 aaPredicted RBP16.33■□□□□ 0.21
CCDC40-201ENST00000269318 CACNA2D2Q9NY47 1150 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 STOML1Q9UBI4 398 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 PPM1HQ9ULR3 514 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 ITM2BQ9Y287 266 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 KIAA1549LQ6ZVL6 1849 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 ANKRD12Q6UB98 2062 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 EDDM13A0A1B0GTR0 161 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 KPNA3O00505 521 aaPredicted RBP16.33■□□□□ 0.2
CCDC40-201ENST00000269318 FNDC3BQ53EP0 1204 aaKnown RBP16.33■□□□□ 0.2
CCDC40-201ENST00000269318 TCHHL1Q5QJ38 904 aaPredicted RBP16.33■□□□□ 0.2
CCDC40-201ENST00000269318 ICE2Q659A1 982 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 NAIF1Q69YI7 327 aaPredicted RBP16.33■□□□□ 0.2
CCDC40-201ENST00000269318 REP15Q6BDI9 236 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 ERAP2Q6P179 960 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 TMIEQ8NEW7 156 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 DCUN1D1Q96GG9 259 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 CDRT15Q96T59 188 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 EGFL8Q99944 293 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 SLC25A23Q9BV35 468 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 TMEM245Q9H330 911 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 IGFLR1Q9H665 355 aa16.33■□□□□ 0.2
CCDC40-201ENST00000269318 THG1LQ9NWX6 298 aaKnown RBP16.33■□□□□ 0.2
CCDC40-201ENST00000269318 CFAP99D6REC4 459 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 PSMD11O00231 422 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 AP2A2O94973 939 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 ELFN1P0C7U0 828 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 ITGB7P26010 798 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 MRPL19P49406 292 aaKnown RBP16.32■□□□□ 0.2
CCDC40-201ENST00000269318 ERFP50548 548 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 IRX1P78414 480 aaPredicted RBP16.32■□□□□ 0.2
CCDC40-201ENST00000269318 FCHO2Q0JRZ9 810 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 GSTA3Q16772 222 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 ZNF423Q2M1K9 1284 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 CDKL4Q5MAI5 379 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 PLEKHS1Q5SXH7 462 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 AAGABQ6PD74 315 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 SYCE2Q6PIF2 218 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 TMEM184AQ6ZMB5 413 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 SPATA19Q7Z5L4 167 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 VRK3Q8IV63 474 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 TERB1Q8NA31 727 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 OR4F6Q8NGB9 312 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 BTN2A2Q8WVV5 523 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 ARRDC3Q96B67 414 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 TIFAQ96CG3 184 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 VPS35Q96QK1 796 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 SERPINI1Q99574 410 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 TACO1Q9BSH4 297 aaKnown RBP16.32■□□□□ 0.2
CCDC40-201ENST00000269318 IPPKQ9H8X2 491 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 GPR45Q9Y5Y3 372 aa16.32■□□□□ 0.2
CCDC40-201ENST00000269318 FKBP6O75344 327 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 MATN4O95460 622 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 OTCP00480 354 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 CAPN1P07384 714 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 MPC1LP0DKB6 136 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 IDO1P14902 403 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 OPRD1P41143 372 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 GDF5P43026 501 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 THOP1P52888 689 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 HSPA14Q0VDF9 509 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 CEACAM7Q14002 265 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 ZNF234Q14588 700 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 CCDC6Q16204 474 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 KIF19Q2TAC6 998 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 ZNF284Q2VY69 593 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 SCIMPQ6UWF3 145 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 MBOAT1Q6ZNC8 495 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 NRSN1Q8IZ57 195 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 MIER2Q8N344 545 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 CHCHD4Q8N4Q1 142 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 NRG4Q8WWG1 115 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 ASB11Q8WXH4 323 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 OR8D1Q8WZ84 308 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 JADE3Q92613 823 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 SLC12A9Q9BXP2 914 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 ZFP14Q9HCL3 533 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 WWOXQ9NZC7 414 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 PACSIN3Q9UKS6 424 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 CDH7Q9ULB5 785 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 PDE10AQ9Y233 779 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 PCDHGA7Q9Y5G6 932 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 TCF20Q9UGU0 1960 aaKnown RBP16.31■□□□□ 0.2
CCDC40-201ENST00000269318 H0Y858 1186 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 LINC01565O15544 149 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 NRP2O60462 931 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 DIO3P55073 304 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 CDKL1Q00532 357 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 ELAVL3Q14576 367 aaKnown RBP16.31■□□□□ 0.2
CCDC40-201ENST00000269318 C8orf82Q6P1X6 216 aaPredicted RBP16.31■□□□□ 0.2
CCDC40-201ENST00000269318 Q6ZSR9 355 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 RAVER1Q8IY67 606 aaKnown RBP16.31■□□□□ 0.2
CCDC40-201ENST00000269318 PIP4K2CQ8TBX8 421 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 METTL6Q8TCB7 284 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 COQ10AQ96MF6 247 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms