RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 HERC2P3Q9BVR0 1158 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 TNKS2Q9H2K2 1166 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ALG2Q9H553 416 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 PIF1Q9H611 641 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 INTS7Q9NVH2 962 aaKnown RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ZIM2Q9NZV7 527 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 SLAMF8Q9P0V8 285 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 MSRAQ9UJ68 235 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 GNPTGQ9UJJ9 305 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 USP22Q9UPT9 525 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 POLR3HQ9Y535 204 aaPredicted RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 TMEM265A0A087WTH1 108 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ARHGAP10A1A4S6 786 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 FAM234BA2RU67 622 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 GOLGA8CPA6NN73 597 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 PLOD2O00469 737 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 RAD51BO15315 384 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 INPP4BO15327 924 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 FFAR2O15552 330 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 CLDN7O95471 211 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 BMP2P12643 396 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ITGALP20701 1170 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 IL10P22301 178 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 UGT1A1P22309 533 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 UGT1A4P22310 534 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 UGT1A3P35503 534 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 UGT1A5P35504 534 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 TXNL4AP83876 142 aaKnown RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 SEMG2Q02383 582 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 BCL2L1Q07817 233 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 CERS6Q6ZMG9 384 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 CARM1Q86X55 608 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 EPHX4Q8IUS5 362 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 SLC39A11Q8N1S5 342 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 CLDN19Q8N6F1 224 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 NMD3Q96D46 503 aaKnown RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 RPL10LQ96L21 214 aaKnown RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ZNF558Q96NG5 402 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 C17orf80Q9BSJ5 609 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 EPB41L1Q9H4G0 881 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 NSUN3Q9H649 340 aaKnown RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ZFYVE1Q9HBF4 777 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 PRDM6Q9NQX0 595 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ELOVL2Q9NXB9 296 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 CCDC160A6NGH7 325 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 PDLIM1O00151 329 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 HNRNPRO43390 633 aaKnown RBP12.69□□□□□ -0.38
CPSF6-201ENST00000266679 SLC25A14O95258 325 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-201ENST00000266679 URODP06132 367 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 CA3P07451 260 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 CA8P35219 290 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 HNF1BP35680 557 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 GRIK2Q13002 908 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 PCBP2Q15366 365 aaKnown RBP eCLIP12.69□□□□□ -0.382e-15■□□□□ 9.5
CPSF6-201ENST00000266679 RAB30Q15771 203 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 CYP51A1Q16850 503 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 PLA2G4EQ3MJ16 856 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 PPP2R2DQ66LE6 453 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 ZFAND4Q86XD8 727 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 KIAA2013Q8IYS2 634 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 RBFAQ8N0V3 343 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 CBR4Q8N4T8 237 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 NUDT8Q8WV74 236 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 EGFL8Q99944 293 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 C2orf49Q9BVC5 232 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-201ENST00000266679 SLC28A3Q9HAS3 691 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 NDUFA13Q9P0J0 144 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 ZMYM5Q9UJ78 669 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 CRLS1Q9UJA2 301 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 CLEC4EQ9ULY5 219 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 TNPO3Q9Y5L0 923 aaKnown RBP12.69□□□□□ -0.38
CPSF6-201ENST00000266679 V9GYQ6 96 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 RFXAPO00287 272 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 GFRA2O00451 464 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 TRBC1P01850 177 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 RPS3P23396 243 aaKnown RBP eCLIP12.69□□□□□ -0.38
CPSF6-201ENST00000266679 HMOX2P30519 316 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 PIK3CGP48736 1102 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 RGS4P49798 205 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 DEFB103AP81534 67 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 NFATC2Q13469 925 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 RAB33AQ14088 237 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 CHRNA6Q15825 494 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 SLC5A9Q2M3M2 681 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 MYLK3Q32MK0 819 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 KRT80Q6KB66 452 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 RETSATQ6NUM9 610 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 PPP4R4Q6NUP7 873 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 TPGS1Q6ZTW0 290 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 SNX20Q7Z614 316 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 GRIN3AQ8TCU5 1115 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 PROKR1Q8TCW9 393 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 PDLIM5Q96HC4 596 aaKnown RBP12.69□□□□□ -0.38
CPSF6-201ENST00000266679 FAM126AQ9BYI3 521 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-201ENST00000266679 IPPKQ9H8X2 491 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 IL21Q9HBE4 155 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 HEBP1Q9NRV9 189 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 AGPAT4Q9NRZ5 378 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 DUS2Q9NX74 493 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms