RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 GDF5P43026 501 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 CDKN1CP49918 316 aaPredicted RBP14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 TIGD2Q4W5G0 525 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 PRR23CQ6ZRP0 262 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 LRRTM4Q86VH4 590 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 KIAA1191Q96A73 305 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 QRFPRQ96P65 431 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 OLFM1Q99784 485 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 TRPC4Q9UBN4 977 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 LOC285556D6RIA3 1793 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 LOC285095A0A1B0GVY8 99 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 NPIPB15A6NHN6 443 aaPredicted RBP14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 K7EPI3 171 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 HNRNPH1P31943 449 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 ZNF234Q14588 700 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 SAMD4BQ5PRF9 694 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 METTL21CQ5VZV1 264 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 NPAS3Q8IXF0 933 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 CATSPER1Q8NEC5 780 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 MDGA1Q8NFP4 955 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 WFDC5Q8TCV5 224 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 FIG4Q92562 907 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 NOL6Q9H6R4 1146 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 IL17CQ9P0M4 197 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 NDOR1Q9UHB4 597 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 C9JVG2 144 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 LDB2O43679 373 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 SLC22A3O75751 556 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 NTSR1P30989 418 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 PREPP48147 710 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 PTPN5P54829 565 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 CHRNB3Q05901 458 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 TMEM259Q4ZIN3 620 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 PRMT9Q6P2P2 845 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 GK5Q6ZS86 529 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 ZNF534Q76KX8 674 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 CEP68Q76N32 757 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 TRIML2Q8N7C3 387 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 GLYATL1Q969I3 302 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 BBS4Q96RK4 519 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 CCDC28BQ9BUN5 200 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 LRTM1Q9HBL6 345 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 IL37Q9NZH6 218 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 ITM2BQ9Y287 266 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 FAM92AA1XBS5 289 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 TMEM233B4DJY2 109 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 ZW10O43264 779 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 ZNF682O95780 498 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 SOX9P48436 509 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 SPINT3P49223 89 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 CCR3P51677 355 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 CDKN2DP55273 166 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 MANEALQ5VSG8 457 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 CXorf57Q6NSI4 855 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 SHDQ96IW2 340 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 NPAS2Q99743 824 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 ARNT2Q9HBZ2 717 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 SOHLH2Q9NX45 425 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 LEF1Q9UJU2 399 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 DHRS7Q9Y394 339 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 COLEC10Q9Y6Z7 277 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 PARP14Q460N5 1801 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 KANSL1LA0AUZ9 987 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 CLCNKAP51800 687 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 PSME3P61289 254 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 SEPHS2Q99611 448 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 NLNQ9BYT8 704 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 MID1O15344 667 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 ACRV1P26436 265 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 NCALDP61601 193 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 IL23RQ5VWK5 629 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 DHFR2Q86XF0 187 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 TMEM132CQ8N3T6 1108 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 RAB7BQ96AH8 199 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 VPS50Q96JG6 964 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 AIF1LQ9BQI0 150 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 VN1R3Q9BXE9 311 aa14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 MTF2Q9Y483 593 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-201ENST00000265810 I6L893 689 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 KPNB1Q14974 876 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 TGFBIQ15582 683 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 CST6Q15828 149 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 SLC9B1Q4ZJI4 515 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 ACSBG2Q5FVE4 666 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 LCN9Q8WX39 176 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 MOCOSQ96EN8 888 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 NSMCE2Q96MF7 247 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 LENG8Q96PV6 779 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 MMADHCQ9H3L0 296 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 LHX3Q9UBR4 397 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 ZDHHC2Q9UIJ5 367 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 RBBP6Q7Z6E9 1792 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 NUP205Q92621 2012 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 BHMG1C9JSJ3 638 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 FOSL2P15408 326 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 KCTD11Q693B1 232 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 GPR180Q86V85 440 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 TDHQ8IZJ6 230 aa14.22□□□□□ -0.13
PDLIM2-201ENST00000265810 C10orf82Q8WW14 230 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms