RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 FAM8A1Q9UBU6 413 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 TMEM184BQ9Y519 407 aaPredicted RBP15.71■□□□□ 0.11
USE1-201ENST00000263897 SUN1O94901 812 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 ITGB2P05107 769 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 SLC35G4P0C7Q5 338 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 PRSS56P0CW18 603 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 ETS1P14921 441 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 MAP4P27816 1152 aaKnown RBP15.7■□□□□ 0.1
USE1-201ENST00000263897 FOXM1Q08050 763 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 GSE1Q14687 1217 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 SIX1Q15475 284 aaPredicted RBP15.7■□□□□ 0.1
USE1-201ENST00000263897 CCNG2Q16589 344 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 FAM92BQ6ZTR7 304 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 TIPARPQ7Z3E1 657 aaKnown RBP15.7■□□□□ 0.1
USE1-201ENST00000263897 PRUNE1Q86TP1 453 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 PIANPQ8IYJ0 282 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 NLGN4XQ8N0W4 816 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 ZNF843Q8N446 348 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 DNAAF3Q8N9W5 541 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 NLGN4YQ8NFZ3 816 aaPredicted RBP15.7■□□□□ 0.1
USE1-201ENST00000263897 HM13Q8TCT9 377 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 SLC12A9Q9BXP2 914 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 SLC24A2Q9UI40 661 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 DRG1Q9Y295 367 aaKnown RBP15.7■□□□□ 0.1
USE1-201ENST00000263897 COLEC10Q9Y6Z7 277 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 ATMQ13315 3056 aa15.7■□□□□ 0.1
USE1-201ENST00000263897 HELZ2Q9BYK8 2649 aaKnown RBP15.69■□□□□ 0.1
USE1-201ENST00000263897 SMG1Q96Q15 3661 aaKnown RBP15.69■□□□□ 0.1
USE1-201ENST00000263897 E7EVH7 732 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 STK17BO94768 372 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 GAS8O95995 478 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 LIFP15018 202 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 NELFEP18615 380 aaKnown RBP15.69■□□□□ 0.1
USE1-201ENST00000263897 GRIA1P42261 906 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 LMAN1P49257 510 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 PPP1CAP62136 330 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 SH3BP2P78314 561 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 SEMA5AQ13591 1074 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 LAMB3Q13751 1172 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 IL11RAQ14626 422 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 PLCL1Q15111 1095 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 LINC00303Q3SY05 128 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 ZNF658BQ4V348 819 aaPredicted RBP15.69■□□□□ 0.1
USE1-201ENST00000263897 CCDC38Q502W7 563 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 CLDN19Q8N6F1 224 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 GLIS1Q8NBF1 620 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 UBXN4Q92575 508 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 RMDN2Q96LZ7 410 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 OR6C1Q96RD1 312 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 TLR10Q9BXR5 811 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 SEMA4CQ9C0C4 833 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 TRIT1Q9H3H1 467 aaKnown RBP15.69■□□□□ 0.1
USE1-201ENST00000263897 KIR3DX1Q9H7L2 352 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 RAB6BQ9NRW1 208 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 HRASLS2Q9NWW9 162 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 ZNF462Q96JM2 2506 aa15.69■□□□□ 0.1
USE1-201ENST00000263897 IGHV5-51A0A0C4DH38 117 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 CCDC78A2IDD5 438 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 HEATR9A2RTY3 570 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 OR5K3A6NET4 321 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 DLGAP3O95886 979 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 ADRA1DP25100 572 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 MSNP26038 577 aaKnown RBP15.68■□□□□ 0.1
USE1-201ENST00000263897 NDUFS1P28331 727 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 RPL22P35268 128 aaKnown RBP15.68■□□□□ 0.1
USE1-201ENST00000263897 CYP4F2P78329 520 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 CCZ1BP86790 482 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 CCZ1P86791 482 aaPredicted RBP15.68■□□□□ 0.1
USE1-201ENST00000263897 ABHD18Q0P651 414 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 DBN1Q16643 649 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 DUS1LQ6P1R4 473 aaKnown RBP15.68■□□□□ 0.1
USE1-201ENST00000263897 DRICH1Q6PGQ1 229 aaPredicted RBP15.68■□□□□ 0.1
USE1-201ENST00000263897 PPP1R21Q6ZMI0 780 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 CCDC89Q8N998 374 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 EXD3Q8N9H8 876 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 TRIM58Q8NG06 486 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 EXTL1Q92935 676 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 MED8Q96G25 268 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 SLC41A2Q96JW4 573 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 RANBP9Q96S59 729 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 MAP3K3Q99759 626 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 OR52A5Q9H2C5 316 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 COG4Q9H9E3 785 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 VPS37BQ9H9H4 285 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 CASS4Q9NQ75 786 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 SMARCAL1Q9NZC9 954 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 PAK5Q9P286 719 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 RIMKLBQ9ULI2 386 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 HEBP2Q9Y5Z4 205 aa15.68■□□□□ 0.1
USE1-201ENST00000263897 LOC101059948A0A1B0GTJ6 334 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 CCDC162PA2VCL2 907 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 OR6C74A6NCV1 312 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 OR51F1A6NGY5 319 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 AP2A2O94973 939 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 GSTM1P09488 218 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 ZSCAN5DPP0CG00 497 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 FGF5P12034 268 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 PDHA2P29803 388 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 FOXN2P32314 431 aa15.67■□□□□ 0.1
USE1-201ENST00000263897 NSG1P42857 185 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms